RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 CACNA2D1P54289 1103 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 MLLT6P55198 1093 aaPredicted RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 ZXDBP98169 803 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 TSPY1Q01534 308 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 RUNX3Q13761 415 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 PKP1Q13835 747 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 SIM2Q14190 667 aaPredicted RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 FAM171BQ6P995 826 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 EPM2AIP1Q7L775 607 aaPredicted RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 LIMS2Q7Z4I7 341 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 NT5DC4Q86YG4 428 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 NELFCDQ8IXH7 590 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 CCDC65Q8IXS2 484 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 GRAMD1CQ8IYS0 662 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 ADGRF2Q8IZF7 708 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 LRRC52Q8N7C0 313 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 ARL14EPQ8N8R7 260 aaPredicted RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 SPRYD3Q8NCJ5 442 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 PLEKHO2Q8TD55 490 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 C2orf15Q8WU43 125 aaKnown RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 CACTINQ8WUQ7 758 aaKnown RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 ZNF516Q92618 1163 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 CCDC127Q96BQ5 260 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 INTS4Q96HW7 963 aaKnown RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 HPDLQ96IR7 371 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 ZNF560Q96MR9 790 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 GCNAQ96QF7 691 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 MRPL45Q9BRJ2 306 aaKnown RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 TRPC7Q9HCX4 862 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 TDP1Q9NUW8 608 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 TMEM30AQ9NV96 361 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 KBTBD4Q9NVX7 518 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 OBP2AQ9NY56 170 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 HSPBP1Q9NZL4 362 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 GCNT4Q9P109 453 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 ITGA11Q9UKX5 1188 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 WNT6Q9Y6F9 365 aa7.41□□□□□ -1.22
CDH11-208ENST00000563492 PDCD11Q14690 1871 aaKnown RBP7.41□□□□□ -1.22
CDH11-208ENST00000563492 ZNF233A6NK53 670 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 CLDN5O00501 218 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 TMEM191BP0C7N4 346 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 CSH1P0DML2 217 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 CSH2P0DML3 217 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 DLATP10515 647 aaKnown RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 BDNFP23560 247 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 GJA4P35212 333 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 PNPLA4P41247 253 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 CASP4P49662 377 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 NRLP54845 237 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 RPL10AP62906 217 aaKnown RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 ASIC1P78348 528 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 MYL7Q01449 175 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 MESP2Q0VG99 397 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 SMARCB1Q12824 385 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 LRRC32Q14392 662 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 NFE2Q16621 373 aaPredicted RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 DUOXA2Q1HG44 320 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 TMEM196Q5HYL7 178 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 DGKKQ5KSL6 1271 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 TRAPPC11Q7Z392 1133 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 LONP2Q86WA8 852 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 SPATA2LQ8IUW3 424 aaPredicted RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 SFTPA1Q8IWL2 248 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 FAM160A2Q8N612 972 aaPredicted RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 TOP6BLQ8N6T0 577 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 ZNF507Q8TCN5 953 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 SCFD1Q8WVM8 642 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 MRPS31Q92665 395 aaKnown RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 MYLPFQ96A32 169 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 MYRFLQ96LU7 910 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 SYT15Q9BQS2 421 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 FAM126AQ9BYI3 521 aaPredicted RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 DPEP3Q9H4B8 488 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 SMOC1Q9H4F8 434 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 ZSCAN16Q9H4T2 348 aaPredicted RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 TMEM206Q9H813 350 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 AGPAT3Q9NRZ7 376 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 RXFP3Q9NSD7 469 aa7.4□□□□□ -1.22
CDH11-208ENST00000563492 THG1LQ9NWX6 298 aaKnown RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 MORC2Q9Y6X9 1032 aaPredicted RBP7.4□□□□□ -1.22
CDH11-208ENST00000563492 TICRRQ7Z2Z1 1910 aa7.4□□□□□ -1.23
CDH11-208ENST00000563492 FANCMQ8IYD8 2048 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 MYH11P35749 1972 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 MIA3Q5JRA6 1907 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 TRDMT1O14717 391 aaKnown RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 DCLK1O15075 740 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 AXIN1O15169 862 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 POLR2DO15514 142 aaKnown RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 RNF40O75150 1001 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 PPP6R2O75170 966 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 PAPSS2O95340 614 aaPredicted RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 TNNC2P02585 160 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 RETP07949 1114 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 HDCP19113 662 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 AFMP43652 599 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 LHX1P48742 406 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 CDH8P55286 799 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 MYL6P60660 151 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 PLCB2Q00722 1185 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms