RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 P3H2Q8IVL5 708 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 FEZF2Q8TBJ5 459 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 KRCC1Q9NPI7 259 aaPredicted RBP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 GRID1Q9ULK0 1009 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 SNX12Q9UMY4 172 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 HPGDP15428 266 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 C16orf72Q14CZ0 275 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 EPC2Q52LR7 807 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 C4orf22Q6V702 233 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 LONP2Q86WA8 852 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 ARRDC4Q8NCT1 418 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 PPP1R14AQ96A00 147 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 KLF6Q99612 283 aaPredicted RBP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 ANKEF1Q9NU02 776 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 CYP2C8P10632 490 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 RBP3P10745 1247 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 CHN1P15882 459 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 COMTP21964 271 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 OXCT1P55809 520 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 FAM83EQ2M2I3 478 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 CCDC144BQ3MJ40 725 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 CTXN3Q4LDR2 81 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 METTL16Q86W50 562 aaKnown RBP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 ZNF677Q86XU0 584 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 SGF29Q96ES7 293 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 EMILIN2Q9BXX0 1053 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 EPC1Q9H2F5 836 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 MAP10Q9P2G4 905 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 MRFAP1Q9Y605 127 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 TTC37Q6PGP7 1564 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 MYO5CQ9NQX4 1742 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 ENDOD1O94919 500 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 CACHD1Q5VU97 1274 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 KIAA2013Q8IYS2 634 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 ADSSL1Q8N142 457 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 DDI1Q8WTU0 396 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 ECSITQ9BQ95 431 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 MRGBPQ9NV56 204 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 RNF112Q9ULX5 631 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 PDS5AQ29RF7 1337 aaKnown RBP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 SRGNP10124 158 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 GRK3P35626 688 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 DYNC1I2Q13409 638 aaKnown RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 MTF1Q14872 753 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 VPS72Q15906 364 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 MRNIPQ6NTE8 343 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 SLC44A2Q8IWA5 706 aaPredicted RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 TRPM5Q9NZQ8 1165 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 TSPOAP1O95153 1857 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 VPS26AO75436 327 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 AVPR1AP37288 418 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 MAGEA4P43358 317 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 IRAK1BP1Q5VVH5 260 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 GALNT4Q8N4A0 578 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 C1orf131Q8NDD1 294 aaKnown RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 ZKSCAN4Q969J2 545 aaPredicted RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 VPS33BQ9H267 617 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 JMJD4Q9H9V9 463 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 EPHB3P54753 998 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 MAP3K7CLP57077 242 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 NAB2Q15742 525 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 POTEAQ6S8J7 498 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 MMGT1Q8N4V1 131 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 STAMBPL1Q96FJ0 436 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 PPCSQ9HAB8 311 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 SMAPO00193 183 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 CAND2O75155 1236 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 RASA1P20936 1047 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 RPS6P62753 249 aaKnown RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 RPL10AP62906 217 aaKnown RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 MROH9Q5TGP6 573 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 LINC00116Q8NCU8 138 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 VPS50Q96JG6 964 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 KCTD10Q9H3F6 313 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 DYRK1BQ9Y463 629 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 CDY2AQ9Y6F7 541 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 CDY1Q9Y6F8 540 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 ARHGEF5Q12774 1597 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 NCF1BA6NI72 391 aaPredicted RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 USP27XA6NNY8 438 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 NCF1CA8MVU1 366 aaPredicted RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 RHOBTB3O94955 611 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 NCF1P14598 390 aaPredicted RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 WEE1P30291 646 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 RPS7P62081 194 aaKnown RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 TRIP4Q15650 581 aaPredicted RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 EDRF1Q3B7T1 1238 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 DDX42Q86XP3 938 aaKnown RBP eCLIP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms