RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 SCN1AP35498 2009 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 TRIP11Q15643 1979 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 PDCD11Q14690 1871 aaKnown RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 PIRO00625 290 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 SPTLC1O15269 473 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 SEPT4O43236 478 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 OPA1O60313 960 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 SKAP2O75563 359 aaPredicted RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 AP1G2O75843 785 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 MICAL2O94851 1124 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 C6orf222P0C671 652 aaPredicted RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 KCNE1P15382 129 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 AKAP5P24588 427 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 GPD2P43304 727 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 EPHB4P54760 987 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 SOX4Q06945 474 aaPredicted RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 MGAT3Q09327 533 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 NNTQ13423 1086 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 LIN9Q5TKA1 542 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 CCDC70Q6NSX1 233 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 EMBQ6PCB8 327 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 ADAT2Q7Z6V5 191 aaKnown RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 DDX42Q86XP3 938 aaKnown RBP eCLIP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 IFT20Q8IY31 132 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 ARFGAP1Q8N6T3 406 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 C12orf50Q8NA57 414 aaPredicted RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 PIK3R5Q8WYR1 880 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 CPXM1Q96SM3 734 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 MRPL45Q9BRJ2 306 aaKnown RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 MTG1Q9BT17 334 aaPredicted RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 FAM124BQ9H5Z6 455 aaPredicted RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 PARVAQ9NVD7 372 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 RNF186Q9NXI6 227 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 BARX2Q9UMQ3 279 aaPredicted RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 SCINQ9Y6U3 715 aa10.8□□□□□ -0.68
TUBGCP4-202ENST00000561691 THSD7BQ9C0I4 1608 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 SMIM28A0A1B0GU29 152 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 TLR3O15455 904 aaKnown RBP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 KPNA6O60684 536 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 GABBR2O75899 941 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 CALB1P05937 261 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 PECAM1P16284 738 aaPredicted RBP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 CCND3P30281 292 aaPredicted RBP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 GABRB2P47870 512 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 RAB27AP51159 221 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 NDST1P52848 882 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 KLF1Q13351 362 aaPredicted RBP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 CNGA2Q16280 664 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 PKDCCQ504Y2 493 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 GLRA4Q5JXX5 417 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 CYP4A22Q5TCH4 519 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 C9orf57Q5W0N0 161 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 DUPD1Q68J44 220 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 SND1Q7KZF4 910 aaKnown RBP eCLIP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 KIRREL3Q8IZU9 778 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 MREGQ8N565 214 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 C7orf31Q8N865 590 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 C3orf20Q8ND61 904 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 SMC1BQ8NDV3 1235 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 C18orf8Q96DM3 657 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 TRIM51Q9BSJ1 452 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 CENPHQ9H3R5 247 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 MRPL47Q9HD33 250 aaKnown RBP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 PCYOX1Q9UHG3 505 aa10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 PIN4Q9Y237 131 aaKnown RBP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.79□□□□□ -0.68
TUBGCP4-202ENST00000561691 GOLGA6L7A0A1B0GV03 622 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 PHF2O75151 1096 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 CHRNA1P02708 482 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 ERBB2P04626 1255 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 VDRP11473 427 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 HSPA6P17066 643 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 IBSPP21815 317 aaPredicted RBP10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 IGFBP6P24592 240 aaPredicted RBP10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 LSP1P33241 339 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 MRPS6P82932 125 aaKnown RBP10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 IFFO1Q0D2I5 559 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 GNASQ5JWF2 1037 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 RNF187Q5TA31 235 aaPredicted RBP10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 MFSD14CQ5VZR4 134 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 TXNRD3NBQ6F5E7 133 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 TAF2Q6P1X5 1199 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 KDM7AQ6ZMT4 941 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 SERINC5Q86VE9 423 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 SESTD1Q86VW0 696 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 XYLT1Q86Y38 959 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 KATNAL2Q8IYT4 538 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 LRRC52Q8N7C0 313 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 NIPA2Q8N8Q9 360 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 JOSD2Q8TAC2 188 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 KBTBD7Q8WVZ9 684 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 NAP1L3Q99457 506 aaPredicted RBP10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 SENP6Q9GZR1 1112 aaPredicted RBP10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 CPSF2Q9P2I0 782 aaKnown RBP10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 IPPQ9Y573 584 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 CASP8AP2Q9UKL3 1982 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 DNAH12Q6ZR08 3092 aa10.78□□□□□ -0.68
TUBGCP4-202ENST00000561691 MEIS3P2A8K0S8 358 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms