RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 PAQR9Q6ZVX9 377 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 PALB2Q86YC2 1186 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 DCP1BQ8IZD4 617 aaKnown RBP13.43□□□□□ -0.26
CMTM4-203ENST00000561680 FUKQ8N0W3 1084 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 SLC30A5Q8TAD4 765 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 SLC2A14Q8TDB8 520 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 POF1BQ8WVV4 589 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 MYLPFQ96A32 169 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 CYFIP2Q96F07 1278 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 PCED1BQ96HM7 432 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 CCDC42Q96M95 316 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 CLSTN3Q9BQT9 956 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 B3GNT5Q9BYG0 378 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 DEF6Q9H4E7 631 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 SLC28A3Q9HAS3 691 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.43□□□□□ -0.26
CMTM4-203ENST00000561680 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
CMTM4-203ENST00000561680 FNIP2Q9P278 1114 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 GTF3C4Q9UKN8 822 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 TSPAN16Q9UKR8 245 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 NENFQ9UMX5 172 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 SSX2IPQ9Y2D8 614 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 IRAK3Q9Y616 596 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 CDY1Q9Y6F8 540 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 ATP8B3O60423 1300 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 A0A087X0T9 212 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 M0QYV0 167 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 GRM6O15303 877 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 ADAM12O43184 909 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 AKR1B10O60218 316 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 LSM8O95777 96 aaKnown RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 CYP1A1P04798 512 aaPredicted RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 FAM228BP0C875 321 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 CPB1P15086 417 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 RPL17P18621 184 aaKnown RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 CDH5P33151 784 aaPredicted RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 CYLC1P35663 651 aaPredicted RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 BCAT1P54687 386 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 ERVFC1P60507 584 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 NOMO3P69849 1222 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 ROR1Q01973 937 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 SMARCB1Q12824 385 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 GPR17Q13304 367 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 GPM6BQ13491 265 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 CAMK1Q14012 370 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 SMC1AQ14683 1233 aaKnown RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 MTF1Q14872 753 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 NFE2Q16621 373 aaPredicted RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 CLEC16AQ2KHT3 1053 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 PKDCCQ504Y2 493 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 DENND1BQ6P3S1 775 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 C4orf50Q6ZRC1 276 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 FAM35AQ86V20 835 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 AUTS2Q8WXX7 1259 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 PCDHB18PQ96TA0 734 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 TCF25Q9BQ70 676 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 LHX5Q9H2C1 402 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 RXFP1Q9HBX9 757 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 ENTPD7Q9NQZ7 604 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 SEPT11Q9NVA2 429 aaKnown RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 ADAMTS1Q9UHI8 967 aa13.42□□□□□ -0.26
CMTM4-203ENST00000561680 HELZP42694 1942 aaKnown RBP13.42□□□□□ -0.26
CMTM4-203ENST00000561680 NOTCH4Q99466 2003 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 WDR27A2RRH5 827 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 MTMR11A4FU01 709 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 EIF3CLB5ME19 914 aaKnown RBP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 CLDN5O00501 218 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 NDUFA10O95299 355 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 LCA5LO95447 670 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 VNN2O95498 520 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 UNGP13051 313 aaPredicted RBP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 ADORA2BP29275 332 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 OR1D2P34982 312 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 DEKP35659 375 aaKnown RBP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 NDUFV1P49821 464 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 CYP27A1Q02318 531 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 CENPCQ03188 943 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 GFPT1Q06210 699 aaPredicted RBP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 BST2Q10589 180 aaKnown RBP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 CFAP221Q4G0U5 840 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 HS1BP3Q53T59 392 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 TMC7Q7Z402 723 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 PASD1Q8IV76 773 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 ANKRD52Q8NB46 1076 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 GDPD5Q8WTR4 605 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 C2orf15Q8WU43 125 aaKnown RBP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 FUBP3Q96I24 572 aaKnown RBP eCLIP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 EIF3CQ99613 913 aaKnown RBP13.41□□□□□ -0.26
CMTM4-203ENST00000561680 MED10Q9BTT4 135 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 ZNF518BQ9C0D4 1074 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 PDCL3Q9H2J4 239 aa13.41□□□□□ -0.26
CMTM4-203ENST00000561680 CERS4Q9HA82 394 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms