RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 OR4Q2P0C623 313 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 HNRNPH3P31942 346 aaKnown RBP12.87□□□□□ -0.35
IRF9-211ENST00000560852 ELF1P32519 619 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
IRF9-211ENST00000560852 CLCN1P35523 988 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 KLK7P49862 253 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
IRF9-211ENST00000560852 APBA1Q02410 837 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 DUSP4Q13115 394 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 PLD1Q13393 1074 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 GJB7Q6PEY0 223 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 TMEM270Q6UE05 265 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 SCARA5Q6ZMJ2 495 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 GPR149Q86SP6 731 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 ANKRD52Q8NB46 1076 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 RBBP8NLQ8NC74 664 aaPredicted RBP12.87□□□□□ -0.35
IRF9-211ENST00000560852 ZNF707Q96C28 371 aaPredicted RBP12.87□□□□□ -0.35
IRF9-211ENST00000560852 MYRFLQ96LU7 910 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 PRKD2Q9BZL6 878 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 ADAM7Q9H2U9 754 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 SFXN1Q9H9B4 322 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 AIPL1Q9NZN9 384 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 AJAP1Q9UKB5 411 aaPredicted RBP12.87□□□□□ -0.35
IRF9-211ENST00000560852 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 SOBPA7XYQ1 873 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 O00370 1275 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 TBX10O75333 385 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 C8AP07357 584 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 CD58P19256 250 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 POLR2FP61218 127 aaKnown RBP12.86□□□□□ -0.35
IRF9-211ENST00000560852 PTK2Q05397 1052 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 PUS10Q3MIT2 529 aaKnown RBP12.86□□□□□ -0.35
IRF9-211ENST00000560852 SGO2Q562F6 1265 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 PPP1R26Q5T8A7 1209 aaPredicted RBP12.86□□□□□ -0.35
IRF9-211ENST00000560852 LIN9Q5TKA1 542 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 ZNF677Q86XU0 584 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
IRF9-211ENST00000560852 VSTM4Q8IW00 320 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 DRC7Q8IY82 874 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 C12orf29Q8N999 325 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 LEMD2Q8NC56 503 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 SMRP1Q8NCR6 262 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 STK32AQ8WU08 396 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 ZNF606Q8WXB4 792 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 SUSD6Q92537 303 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 HLA-CQ95604 372 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 MYLPFQ96A32 169 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 HEXIM2Q96MH2 286 aaKnown RBP12.86□□□□□ -0.35
IRF9-211ENST00000560852 ZSWIM1Q9BR11 485 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 DUSP16Q9BY84 665 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 LHX5Q9H2C1 402 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 UBE2ZQ9H832 354 aaPredicted RBP12.86□□□□□ -0.35
IRF9-211ENST00000560852 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.357e-11■■■■■ 260.8
IRF9-211ENST00000560852 MAN1C1Q9NR34 630 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
IRF9-211ENST00000560852 PCDHB4Q9Y5E5 795 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.86□□□□□ -0.35
IRF9-211ENST00000560852 INSL5Q9Y5Q6 135 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 PRRC2BQ5JSZ5 2229 aaKnown RBP12.86□□□□□ -0.35
IRF9-211ENST00000560852 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
IRF9-211ENST00000560852 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 TRIM66O15016 1216 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 LINC01565O15544 149 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 SOX5P35711 763 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 PRKCIP41743 596 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 STAT1P42224 750 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 PSMC1P62191 440 aaKnown RBP12.85□□□□□ -0.35
IRF9-211ENST00000560852 TBX2Q13207 712 aaPredicted RBP12.85□□□□□ -0.35
IRF9-211ENST00000560852 TRIM14Q14142 442 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 LEXMQ3ZCV2 418 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 MDH1BQ5I0G3 518 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 IRF2BP2Q7Z5L9 587 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 FAM35AQ86V20 835 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 SCML4Q8N228 414 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 ZMIZ2Q8NF64 920 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 MAFAQ8NHW3 353 aaPredicted RBP12.85□□□□□ -0.35
IRF9-211ENST00000560852 SLC35F5Q8WV83 523 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 TFAP2BQ92481 460 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 DDX1Q92499 740 aaKnown RBP12.85□□□□□ -0.35
IRF9-211ENST00000560852 PSMG2Q969U7 264 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 TRMT2BQ96GJ1 504 aaKnown RBP12.85□□□□□ -0.35
IRF9-211ENST00000560852 SMARCD1Q96GM5 515 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 TTLL2Q9BWV7 592 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 LRRC3Q9BY71 257 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 CYP4F11Q9HBI6 524 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 CYLDQ9NQC7 956 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 EHD2Q9NZN4 543 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.85□□□□□ -0.35
IRF9-211ENST00000560852 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 NCANO14594 1321 aa12.85□□□□□ -0.35
IRF9-211ENST00000560852 CCDC195A0A1B0GUA6 201 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 HHLA1C9JL84 531 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 PRRG1O14668 218 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 MED7O43513 233 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 XYLBO75191 536 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 SETSIPP0DME0 302 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms