RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 NR1H3Q13133 447 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 CBLBQ13191 982 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 MORF4L2Q15014 288 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 RASA2Q15283 850 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 DGKDQ16760 1214 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 FAM110CQ1W6H9 321 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 PTPN20Q4JDL3 420 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 ERMARDQ5T6L9 678 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 JADE1Q6IE81 842 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 HIBCHQ6NVY1 386 aaPredicted RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 BBS12Q6ZW61 710 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 ZCCHC9Q8N567 271 aaKnown RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 ALLCQ8N6M5 410 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 MYCBPAPQ8TBZ2 947 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 ZNF473Q8WTR7 871 aaKnown RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 TFAP2BQ92481 460 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 USP6NLQ92738 828 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 FAM84AQ96KN4 292 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 CCDC114Q96M63 670 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 ACAP3Q96P50 834 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 MCEEQ96PE7 176 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 CCT8L2Q96SF2 557 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 FDXACB1Q9BRP7 624 aaPredicted RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 C16orf70Q9BSU1 422 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 SYT17Q9BSW7 474 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 CDC42EP4Q9H3Q1 356 aaKnown RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 SEMA4AQ9H3S1 761 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 TUT1Q9H6E5 874 aaKnown RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 MINDY3Q9H8M7 445 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 PCDH9Q9HC56 1237 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 CYLDQ9NQC7 956 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 PDGFCQ9NRA1 345 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 WDR70Q9NW82 654 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 BCCIPQ9P287 314 aaKnown RBP eCLIP10.23□□□□□ -0.77
RTF1-206ENST00000560447 LGALS13Q9UHV8 139 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 BARX2Q9UMQ3 279 aaPredicted RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.23□□□□□ -0.77
RTF1-206ENST00000560447 SHOC2Q9UQ13 582 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 AKT3Q9Y243 479 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 USTQ9Y2C2 406 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 CCL15-CCL14A0A0B4J2E2 113 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 MYO1CO00159 1063 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 TP73O15350 636 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 TSPAN1O60635 241 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 CALCAP01258 141 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 ERBB2P04626 1255 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 NFICP08651 508 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 CD19P15391 556 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 TSHRP16473 764 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 ARF4P18085 180 aaPredicted RBP10.22□□□□□ -0.77
RTF1-206ENST00000560447 PSMA2P25787 234 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 HPDP32754 393 aaPredicted RBP10.22□□□□□ -0.77
RTF1-206ENST00000560447 SCNN1AP37088 669 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 CDKN2BP42772 138 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 MAGEA9P43362 315 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 PSMC1P62191 440 aaKnown RBP10.22□□□□□ -0.77
RTF1-206ENST00000560447 RPL7AP62424 266 aaKnown RBP10.22□□□□□ -0.77
RTF1-206ENST00000560447 ZNF252P-AS1Q0IIN9 211 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 MYO1EQ12965 1108 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 OASLQ15646 514 aaKnown RBP10.22□□□□□ -0.77
RTF1-206ENST00000560447 GRIK4Q16099 956 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 CCL15Q16663 113 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 SLC10A6Q3KNW5 377 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 WDR72Q3MJ13 1102 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 IZUMO3Q5VZ72 239 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 DENND1BQ6P3S1 775 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 LCLAT1Q6UWP7 414 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 MFSD7Q6UXD7 560 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 DLK2Q6UY11 383 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 MOB2Q70IA6 237 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 LAPTM4BQ86VI4 370 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 TAX1BP1Q86VP1 789 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 UNC93AQ86WB7 457 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 XYLT1Q86Y38 959 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 TDRPQ86YL5 185 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 ZDHHC17Q8IUH5 632 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 LRRC52Q8N7C0 313 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 SLC4A11Q8NBS3 891 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 SLC35B2Q8TB61 432 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 STK32AQ8WU08 396 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 TRAPPC12Q8WVT3 735 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 PPM1EQ8WY54 764 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 ELMO3Q96BJ8 720 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 HPDLQ96IR7 371 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 CFAP57Q96MR6 1250 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 XPO6Q96QU8 1125 aaKnown RBP10.22□□□□□ -0.77
RTF1-206ENST00000560447 R3HDMLQ9H3Y0 253 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 FETUBQ9UGM5 382 aa10.22□□□□□ -0.77
RTF1-206ENST00000560447 SMIM35A0A1B0GVV1 85 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 GOLGA8CPA6NN73 597 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 BTBD19C9JJ37 291 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 E7EVH7 732 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 O00370 1275 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 XPOTO43592 962 aaKnown RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 CDH16O75309 829 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 RNF8O76064 485 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 KIAA0754O94854 1291 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms