RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PPP2R3BQ9Y5P8 575 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 MYL12BO14950 172 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 CRKP46108 304 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 GALNTL6Q49A17 601 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 C3orf20Q8ND61 904 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZNF671Q8TAW3 534 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 BHMT2Q9H2M3 363 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZNF302Q9NR11 478 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 GSTK1Q9Y2Q3 226 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 WEE2P0C1S8 567 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 TARSP26639 723 aaKnown RBP14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 RPL19P84098 196 aaKnown RBP14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 KIF12Q96FN5 646 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 CHRM3P20309 590 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 LSP1P33241 339 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZMYND11Q15326 602 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 SKIV2LQ15477 1246 aaKnown RBP14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 SLC44A2Q8IWA5 706 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 TRAPPC9Q96Q05 1148 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 RBM15Q96T37 977 aaKnown RBP eCLIP14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 PI4KBQ9UBF8 816 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 KDM5BQ9UGL1 1544 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 PRXQ9BXM0 1461 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 TEX46H3BTG2 121 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 P4HA2O15460 535 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 TRAPPC3O43617 180 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZNF682O95780 498 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 TSPAN19P0C672 248 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 CHRNDQ07001 517 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 MAPK11Q15759 364 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 CLEC16AQ2KHT3 1053 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 KIF2BQ8N4N8 673 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 PAIP1Q9H074 479 aaKnown RBP14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 MGAT4DA6NG13 374 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 LRRC14BA6NHZ5 514 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 MGRN1O60291 552 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 ENO2P09104 434 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 CCNA2P20248 432 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 SERPINB5P36952 375 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 GRIK3Q13003 919 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 ABRAXAS1Q6UWZ7 409 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 MIER2Q8N344 545 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 DCAF4Q8WV16 495 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 AMACRQ9UHK6 382 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 RCOR1Q9UKL0 485 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 TNFRSF21O75509 655 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 FGRP09769 529 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 STAT3P40763 770 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 RUNDC3AQ59EK9 446 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 TRPV3Q8NET8 790 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 RAD54LQ92698 747 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 KLHL28Q9NXS3 571 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 TPRKBQ9Y3C4 175 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 ESYT3A0FGR9 886 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 PRKD2Q9BZL6 878 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 RBAKQ9NYW8 714 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZNF222Q9UK12 451 aa14.36□□□□□ -0.11
CSPG4P12-202ENST00000559989 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 EEF2KO00418 725 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SMNDC1O75940 238 aaKnown RBP eCLIP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 ATG7O95352 703 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 CCDC24Q8N4L8 307 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 NSUN7Q8NE18 718 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 CCDC59Q9P031 241 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SH3BP1Q9Y3L3 701 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SNX13Q9Y5W8 968 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 RNF123Q5XPI4 1314 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 BAIAP3O94812 1187 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 CYP2D6P10635 497 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 BNC2Q6ZN30 1099 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 PALB2Q86YC2 1186 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 KPNA6O60684 536 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SEMA3FQ13275 785 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 PRMT9Q6P2P2 845 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 PADI6Q6TGC4 694 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 CAPSLQ8WWF8 208 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 TMEM138Q9NPI0 162 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 PHF20L1A8MW92 1017 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 OR6B1O95007 311 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SFNP31947 248 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 EXOSC10Q01780 885 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 CACNB2Q08289 660 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SUZ12Q15022 739 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 RORBQ92753 470 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 DUOX2Q9NRD8 1548 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 ATP9AO75110 1047 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 GCP02774 474 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 QARSP47897 775 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 ATN1P54259 1190 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 GMFBP60983 142 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 COASYQ13057 564 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SIX5Q8N196 739 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 ACAD9Q9H845 621 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 CAB39LQ9H9S4 337 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 BTBD7Q9P203 1132 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 WDR35Q9P2L0 1181 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SIK3Q9Y2K2 1263 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 KLHL41O60662 606 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms