RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 PGBD3Q8N328 593 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 DEFB119Q8N690 84 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 FRMD1Q8N878 549 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 SPRYD3Q8NCJ5 442 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 SPIRE2Q8WWL2 714 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 RAB34Q9BZG1 259 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 TMEM74BQ9NUR3 256 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 MBD1Q9UIS9 605 aaPredicted RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 MMP17Q9ULZ9 603 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 GPSM3Q9Y4H4 160 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 PCDHB5Q9Y5E4 795 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 THADAQ6YHU6 1953 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 TSC2P49815 1807 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 PKD1L2Q7Z442 2459 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 H0Y626 953 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 TNFRSF10BO14763 440 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 OPHN1O60890 802 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 TADA3O75528 432 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 TRIM16O95361 564 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 CYP11A1P05108 521 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 USP17L7P0C7H9 530 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 FAM193AP78312 1265 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 SCAPQ12770 1279 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 USP4Q13107 963 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 SEMA3BQ13214 749 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 CRY1Q16526 586 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 KYAT1Q16773 422 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 DDR2Q16832 855 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 PIP4P1Q86T03 277 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 WHAMMQ8TF30 809 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 SLC22A12Q96S37 553 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 CYP2S1Q96SQ9 504 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 PLIN2Q99541 437 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 MSTO1Q9BUK6 570 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 TIPINQ9BVW5 301 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 TMLHEQ9NVH6 421 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 NOL7Q9UMY1 257 aaKnown RBP11.63□□□□□ -0.55
TRAF3-207ENST00000559734 STK24Q9Y6E0 443 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 ABCA7Q8IZY2 2146 aa11.63□□□□□ -0.55
TRAF3-207ENST00000559734 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 K7EQS6 105 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 PIRO00625 290 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 OGTO15294 1046 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 KLF8O95600 359 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-207ENST00000559734 NFATC1O95644 943 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 HNRNPLP14866 589 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAF3-207ENST00000559734 ITPKAP23677 461 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 GUCY2CP25092 1073 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 TIE1P35590 1138 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 OPRD1P41143 372 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 P2RY2P41231 377 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 TAF6P49848 677 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 TSPY1Q01534 308 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 GFPT1Q06210 699 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-207ENST00000559734 SMARCB1Q12824 385 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 KCNB1Q14721 858 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 ZC2HC1CQ53FD0 456 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-207ENST00000559734 SLC23A3Q6PIS1 610 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 ALLCQ8N6M5 410 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 ARL14EPQ8N8R7 260 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-207ENST00000559734 TXNDC5Q8NBS9 432 aaKnown RBP11.62□□□□□ -0.55
TRAF3-207ENST00000559734 OR2I1PQ8NGU4 316 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 HMGB4Q8WW32 186 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 C8orf76Q96K31 380 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 FNBP1Q96RU3 617 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 NTPCRQ9BSD7 190 aaKnown RBP11.62□□□□□ -0.55
TRAF3-207ENST00000559734 LINC00597Q9H2U6 94 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 ZDHHC4Q9NPG8 344 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 UXTQ9UBK9 157 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-207ENST00000559734 KCNG1Q9UIX4 513 aa11.62□□□□□ -0.55
TRAF3-207ENST00000559734 MYO16Q9Y6X6 1858 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 ZZEF1O43149 2961 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
TRAF3-207ENST00000559734 KIAA1549LQ6ZVL6 1849 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 TCRBV21S2A2A0A5A6 115 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 H0YCG3 227 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 K7ENM7 598 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 SCAMP3O14828 347 aaKnown RBP11.61□□□□□ -0.55
TRAF3-207ENST00000559734 NEFLP07196 543 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 PAX3P23760 479 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 ZNF423Q2M1K9 1284 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 SFTPA1Q8IWL2 248 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 SCN4BQ8IWT1 228 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 CD302Q8IX05 232 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 MINDY1Q8N5J2 469 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 IGSF22Q8N9C0 903 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 HNRNPLLQ8WVV9 542 aaKnown RBP11.61□□□□□ -0.55
TRAF3-207ENST00000559734 CAMK1GQ96NX5 476 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 TSPAN18Q96SJ8 248 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 CCDC86Q9H6F5 360 aaKnown RBP11.61□□□□□ -0.55
TRAF3-207ENST00000559734 TMEM206Q9H813 350 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 POLMQ9NP87 494 aaPredicted RBP11.61□□□□□ -0.55
TRAF3-207ENST00000559734 SLC6A14Q9UN76 642 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 PCDHB9Q9Y5E1 797 aa11.61□□□□□ -0.55
TRAF3-207ENST00000559734 ADAMTS20P59510 1910 aa11.6□□□□□ -0.55
TRAF3-207ENST00000559734 ANO9A1A5B4 782 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms