RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 DHX37Q8IY37 1157 aaKnown RBP6.88□□□□□ -1.31
CRNDE-207ENST00000559598 EFHBQ8N7U6 833 aa6.88□□□□□ -1.31
CRNDE-207ENST00000559598 LINC00482Q8N8I6 264 aa6.88□□□□□ -1.31
CRNDE-207ENST00000559598 LINC01356Q8N9X3 169 aa6.88□□□□□ -1.31
CRNDE-207ENST00000559598 NKD2Q969F2 451 aaPredicted RBP6.88□□□□□ -1.31
CRNDE-207ENST00000559598 FBXW5Q969U6 566 aa6.88□□□□□ -1.31
CRNDE-207ENST00000559598 NOX5Q96PH1 765 aa6.88□□□□□ -1.31
CRNDE-207ENST00000559598 IWS1Q96ST2 819 aa6.88□□□□□ -1.31
CRNDE-207ENST00000559598 GORASP1Q9BQQ3 440 aa6.88□□□□□ -1.31
CRNDE-207ENST00000559598 DSEQ9UL01 958 aa6.88□□□□□ -1.31
CRNDE-207ENST00000559598 ACACBO00763 2458 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 CEP250Q9BV73 2442 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 TSPY2A6NKD2 308 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 H0Y858 1186 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 FFAR3O14843 346 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 GPAA1O43292 621 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 APPP05067 770 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 SRGAP2CP0DJJ0 459 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 SRGAP2BP0DMP2 458 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 NCLP19338 710 aaKnown RBP6.87□□□□□ -1.31
CRNDE-207ENST00000559598 NOVP48745 357 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 STXBP2Q15833 593 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 KCNV1Q6PIU1 500 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 ZC3H7AQ8IWR0 971 aaKnown RBP6.87□□□□□ -1.31
CRNDE-207ENST00000559598 KBTBD3Q8NAB2 608 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 NSUN6Q8TEA1 469 aaKnown RBP6.87□□□□□ -1.31
CRNDE-207ENST00000559598 CLEC4DQ8WXI8 215 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 ZBTB8AQ96BR9 441 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 SYT3Q9BQG1 590 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 NAPBQ9H115 298 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 TLR9Q9NR96 1032 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 TMEM260Q9NX78 707 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 ZNF292O60281 2723 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 PLXNA4Q9HCM2 1894 aa6.87□□□□□ -1.31
CRNDE-207ENST00000559598 NCOR2Q9Y618 2525 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 C17orf102A2RUQ5 167 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 PLD2O14939 933 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 GRM6O15303 877 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 PPFIA4O75335 1185 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 RASGRP1O95267 797 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 LRG1P02750 347 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 HSP90AA1P07900 732 aaKnown RBP6.86□□□□□ -1.31
CRNDE-207ENST00000559598 LINC00271P0C7V0 271 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 ZNF286BP0CG31 522 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 PYGMP11217 842 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 HOXC8P31273 242 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 RRP1P56182 461 aaKnown RBP6.86□□□□□ -1.31
CRNDE-207ENST00000559598 SNAP25P60880 206 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 PPARAQ07869 468 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 TUSC3Q13454 348 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 LY6KQ17RY6 165 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 SEPT14Q6ZU15 432 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 BRAPQ7Z569 592 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 RBM12BQ8IXT5 1001 aaKnown RBP6.86□□□□□ -1.31
CRNDE-207ENST00000559598 UBALD2Q8IYN6 164 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 TP53I13Q8NBR0 393 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-207ENST00000559598 ATP6V0A1Q93050 837 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 MAGEB10Q96LZ2 347 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-207ENST00000559598 RIPOR3Q96MK2 946 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 CDCA3Q99618 268 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-207ENST00000559598 INCENPQ9NQS7 918 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 CATSPERZQ9NTU4 200 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 USP15Q9Y4E8 981 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-207ENST00000559598 CACNA1GO43497 2377 aa6.86□□□□□ -1.31
CRNDE-207ENST00000559598 DMXL1Q9Y485 3027 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 ABCB11O95342 1321 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 CCDC171Q6TFL3 1326 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 FANCMQ8IYD8 2048 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 CCDC66A2RUB6 948 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 GSTA4O15217 222 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 RNF113AO15541 343 aaKnown RBP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 LINC01565O15544 149 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 LTFP02788 710 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 CHGBP05060 677 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 TOP1P11387 765 aaKnown RBP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 EPHA5P54756 1037 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 ITGA1P56199 1179 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 UBE3AQ05086 875 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 GRIN1Q05586 938 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 BTG3Q14201 252 aaPredicted RBP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 GPR19Q15760 415 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 GPATCH4Q5T3I0 446 aaKnown RBP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 FAM43BQ6ZT52 329 aaPredicted RBP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 KYQ8NBH2 561 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 SH3RF2Q8TEC5 729 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 SUSD6Q92537 303 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 RPGRIP1Q96KN7 1286 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 TRIM39Q9HCM9 518 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 PARD6AQ9NPB6 346 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 HSPBP1Q9NZL4 362 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 CBLCQ9ULV8 474 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 TELO2Q9Y4R8 837 aa6.85□□□□□ -1.31
CRNDE-207ENST00000559598 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
CRNDE-207ENST00000559598 LOXHD1Q8IVV2 1947 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms