RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 POMGNT1Q8WZA1 660 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 EZH1Q92800 747 aaPredicted RBP17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 CD101Q93033 1021 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 IKZF4Q9H2S9 585 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 ST6GALNAC4Q9H4F1 302 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 DUS2Q9NX74 493 aaKnown RBP17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 UXTQ9UBK9 157 aaPredicted RBP17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 NOL4O94818 638 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 IL18RAPO95256 599 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 APBB3O95704 486 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 CYP2F1P24903 491 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 PNPLA4P41247 253 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 RPL10AP62906 217 aaKnown RBP17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 CREB5Q02930 508 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 FAM160A1Q05DH4 1040 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 PSMD2Q13200 908 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 DMC1Q14565 340 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 PSAPL1Q6NUJ1 521 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 PDCL2Q8N4E4 241 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 TTC16Q8NEE8 873 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 LARP4BQ92615 738 aaKnown RBP17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 ACDQ96AP0 544 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 TRMT2BQ96GJ1 504 aaKnown RBP17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 CYP2S1Q96SQ9 504 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 EDEM2Q9BV94 578 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 TRPC7Q9HCX4 862 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 EBF1Q9UH73 591 aa17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 ASCC3Q8N3C0 2202 aaKnown RBP17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 MYO18AQ92614 2054 aaKnown RBP17.48■□□□□ 0.39
CDC42BPB-205ENST00000559245 TNRC6BQ9UPQ9 1833 aaKnown RBP17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 CEP192Q8TEP8 1941 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 CAVIN2O95810 425 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 USP17L7P0C7H9 530 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 GJB2P29033 226 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 ADSSP30520 456 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 POLR2BP30876 1174 aaKnown RBP17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 IFNAR2P48551 515 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 GRIN1Q05586 938 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 USP4Q13107 963 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 POSTNQ15063 836 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 ZNF77Q15935 545 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 ZNF720Q7Z2F6 126 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 ATP2A3Q93084 1043 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 MYRFLQ96LU7 910 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 SLC22A12Q96S37 553 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 ACBD6Q9BR61 282 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 TMEM206Q9H813 350 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 ABCB6Q9NP58 842 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 DDX43Q9NXZ2 648 aaKnown RBP17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 L1RE1Q9UN81 338 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 AGAP1Q9UPQ3 857 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 WNT6Q9Y6F9 365 aa17.47■□□□□ 0.39
CDC42BPB-205ENST00000559245 GON4LQ3T8J9 2241 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 TRAV19A0A0A6YYK7 116 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 BCLAF3A2AJT9 711 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 HUS1O60921 280 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 ITGB3P05106 788 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 CKMP06732 381 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 ACAT1P24752 427 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 LONP1P36776 959 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 DGKEP52429 567 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 WNT7BP56706 349 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 TFAMQ00059 246 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 MYL7Q01449 175 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 EML3Q32P44 896 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 INTS6LQ5JSJ4 861 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 KRI1Q8N9T8 703 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 HVCN1Q96D96 273 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 GTF3C4Q9UKN8 822 aa17.46■□□□□ 0.39
CDC42BPB-205ENST00000559245 IGF2RP11717 2491 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 C4orf47A7E2U8 309 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 GBP1P32455 592 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 DDIT3P35638 169 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 NOVA1P51513 510 aaKnown RBP17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 NR1H3Q13133 447 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 OSTM1Q86WC4 334 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 SFR1Q86XK3 245 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 TMEM86AQ8N2M4 240 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 ARL14EPQ8N8R7 260 aaPredicted RBP17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 C1orf127Q8N9H9 656 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 PKMYT1Q99640 499 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 FAM213AQ9BRX8 229 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 INVSQ9Y283 1065 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 PLXND1Q9Y4D7 1925 aa17.45■□□□□ 0.38
CDC42BPB-205ENST00000559245 LNP1A1A4G5 178 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 GIPC1O14908 333 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 PPP1R37O75864 691 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 BMP15O95972 392 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 PROS1P07225 676 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 KCNA1Q09470 495 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 CCDC142Q17RM4 750 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 DAB2IPQ5VWQ8 1189 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 DYMQ7RTS9 669 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 SPATA2LQ8IUW3 424 aaPredicted RBP17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 BRSK2Q8IWQ3 736 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 SCN4BQ8IWT1 228 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 ZSWIM2Q8NEG5 633 aa17.44■□□□□ 0.38
CDC42BPB-205ENST00000559245 TSTD1Q8NFU3 115 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms