RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PCSK1P29120 753 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 JAM2P57087 298 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 MTMR3Q13615 1198 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 E4F1Q66K89 784 aaPredicted RBP11.6□□□□□ -0.55
TPM1-217ENST00000559108 TMEM270Q6UE05 265 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 FAM35AQ86V20 835 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 PPFIBP1Q86W92 1011 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 UNC93AQ86WB7 457 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 RBBP8NLQ8NC74 664 aaPredicted RBP11.6□□□□□ -0.55
TPM1-217ENST00000559108 SMRP1Q8NCR6 262 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 CCDC150Q8NCX0 1101 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 SLC2A14Q8TDB8 520 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 SUSD6Q92537 303 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 CASP10Q92851 521 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 FAXDC2Q96IV6 333 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 KCNK16Q96T55 309 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 NT5C1AQ9BXI3 368 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 LRRC3Q9BY71 257 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 OXCT2Q9BYC2 517 aaPredicted RBP11.6□□□□□ -0.55
TPM1-217ENST00000559108 XPO4Q9C0E2 1151 aaKnown RBP11.6□□□□□ -0.55
TPM1-217ENST00000559108 TTYH3Q9C0H2 523 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 ZNF334Q9HCZ1 680 aaPredicted RBP11.6□□□□□ -0.55
TPM1-217ENST00000559108 PLCB1Q9NQ66 1216 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 FAM207AQ9NSI2 230 aaPredicted RBP11.6□□□□□ -0.55
TPM1-217ENST00000559108 PCDHB4Q9Y5E5 795 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 CCDC195A0A1B0GUA6 201 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 TULP2O00295 520 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 FOXN3O00409 490 aaPredicted RBP11.59□□□□□ -0.55
TPM1-217ENST00000559108 MBTPS2O43462 519 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 GABBR2O75899 941 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 C1RP00736 705 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 P4HA1P13674 534 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 BRD2P25440 801 aaKnown RBP11.59□□□□□ -0.55
TPM1-217ENST00000559108 ADORA2BP29275 332 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 CCR2P41597 374 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 USP46P62068 366 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 TSPY1Q01534 308 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 CYP27A1Q02318 531 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 TWF1Q12792 350 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 BMS1Q14692 1282 aaKnown RBP11.59□□□□□ -0.55
TPM1-217ENST00000559108 DDR2Q16832 855 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 SLC5A9Q2M3M2 681 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 PPP1R26Q5T8A7 1209 aaPredicted RBP11.59□□□□□ -0.55
TPM1-217ENST00000559108 GPR149Q86SP6 731 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 TTC30AQ86WT1 665 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 TMC8Q8IU68 726 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 HS6ST3Q8IZP7 471 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 HLA-CQ95604 372 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 PPP2R3CQ969Q6 453 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 TMEM176AQ96HP8 235 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 SEPT5Q99719 369 aaPredicted RBP11.59□□□□□ -0.55
TPM1-217ENST00000559108 SMOQ99835 787 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 PLEKHA4Q9H4M7 779 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 SFXN1Q9H9B4 322 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 NLRC4Q9NPP4 1024 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 KRT82Q9NSB4 513 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 DZANK1Q9NVP4 752 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
TPM1-217ENST00000559108 USP15Q9Y4E8 981 aaPredicted RBP11.59□□□□□ -0.55
TPM1-217ENST00000559108 PCDHB5Q9Y5E4 795 aa11.59□□□□□ -0.55
TPM1-217ENST00000559108 HHLA1C9JL84 531 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 F8VZ95 297 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 GOLGA6L19H0YKK7 550 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 O00370 1275 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 PRRG1O14668 218 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 MOSPD3O75425 235 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 SERPINC1P01008 464 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 IL9P15248 144 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 HMGA1P17096 107 aaKnown RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 TBXAS1P24557 533 aaPredicted RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 CLCN1P35523 988 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 POLR2FP61218 127 aaKnown RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 CETN1Q12798 172 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 DRAP1Q14919 205 aaPredicted RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 NFE2Q16621 373 aaPredicted RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 PPM1LQ5SGD2 360 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 FKBP15Q5T1M5 1219 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 ARHGAP17Q68EM7 881 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 CLEC20AQ6ZU45 233 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 GPRIN1Q7Z2K8 1008 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 SPATA2LQ8IUW3 424 aaPredicted RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 DCP1BQ8IZD4 617 aaKnown RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 SPPL2BQ8TCT7 592 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 GIPC2Q8TF65 315 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 HDAC7Q8WUI4 952 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 BAP1Q92560 729 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 CYFIP2Q96F07 1278 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 PRKD2Q9BZL6 878 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 ADAM7Q9H2U9 754 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 POMKQ9H5K3 350 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 CD207Q9UJ71 328 aa11.58□□□□□ -0.56
TPM1-217ENST00000559108 HELZP42694 1942 aaKnown RBP11.58□□□□□ -0.56
TPM1-217ENST00000559108 UNC80Q8N2C7 3258 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 FAM170AA1A519 330 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 F8VP50 259 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 CYP26A1O43174 497 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 TADA3O75528 432 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms