RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 GPR158Q5T848 1215 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 SPATA1Q5VX52 437 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 DSTYKQ6XUX3 929 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 USP37Q86T82 979 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 CAMKK1Q8N5S9 505 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 IQUBQ8NA54 791 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 GATA6Q92908 595 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 FAM83CQ9BQN1 747 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 EDEM2Q9BV94 578 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 ATXN3LQ9H3M9 355 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 ASB7Q9H672 318 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 MAGEF1Q9HAY2 307 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 IL21Q9HBE4 155 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 FBRSL1Q9HCM7 1045 aaKnown RBP12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 HPS4Q9NQG7 708 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 CFAP45Q9UL16 551 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 SLC27A5Q9Y2P5 690 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 C2CD2Q9Y426 696 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 STYXL1Q9Y6J8 313 aa12.1□□□□□ -0.47
CHRNA3-205ENST00000559080 LNP1A1A4G5 178 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 MTMR11A4FU01 709 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 DPYSL4O14531 572 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 SOAT2O75908 522 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 IL18RAPO95256 599 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 ODC1P11926 461 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 PAX3P23760 479 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 POU5F1Q01860 360 aaKnown RBP12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 ZNF252P-AS1Q0IIN9 211 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 FOXC1Q12948 553 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 PKP1Q13835 747 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 E2F4Q16254 413 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 SHC4Q6S5L8 630 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 ATAD1Q8NBU5 361 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 STRA6Q9BX79 667 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 TRIM9Q9C026 710 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 SMG9Q9H0W8 520 aaKnown RBP12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 IKZF4Q9H2S9 585 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 TASP1Q9H6P5 420 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 TMEM206Q9H813 350 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 GKN1Q9NS71 199 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 SLC8A2Q9UPR5 921 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 ASB3Q9Y575 518 aa12.09□□□□□ -0.47
CHRNA3-205ENST00000559080 BCLAF3A2AJT9 711 aaKnown RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 SRRM3A6NNA2 597 aaPredicted RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 CDX4O14627 284 aaPredicted RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 PPEF2O14830 753 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 DCLK1O15075 740 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 POLR2DO15514 142 aaKnown RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 ATG13O75143 517 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 RNF40O75150 1001 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 LDHAP00338 332 aaKnown RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 EGFP01133 1207 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 GARTP22102 1010 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 ALDH1A3P47895 512 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 CASP5P51878 434 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 CYP4F8P98187 520 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 DNM1Q05193 864 aaKnown RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 KCNA1Q09470 495 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 SH3PXD2AQ5TCZ1 1133 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 C9orf57Q5W0N0 161 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 ARMCX5Q6P1M9 558 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 NOC3LQ8WTT2 800 aaKnown RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 EZH1Q92800 747 aaPredicted RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 HHIPQ96QV1 700 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 PYM1Q9BRP8 204 aaKnown RBP12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 FAM213AQ9BRX8 229 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 SLC46A2Q9BY10 475 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 KBTBD4Q9NVX7 518 aa12.08□□□□□ -0.48
CHRNA3-205ENST00000559080 PLXNB3Q9ULL4 1909 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 OR6C75A6NL08 312 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 CAVIN2O95810 425 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 ATF6P18850 670 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 TYMPP19971 482 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 ADSSP30520 456 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 LILRA4P59901 499 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 CREB5Q02930 508 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 GRSF1Q12849 480 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 RUNX3Q13761 415 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 MYBPC2Q14324 1141 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 FAM26FQ5R3K3 315 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 NAIF1Q69YI7 327 aaPredicted RBP12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 TRIM68Q6AZZ1 485 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 OVOS1Q6IE37 1185 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 LRSAM1Q6UWE0 723 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 NT5DC4Q86YG4 428 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 BRSK2Q8IWQ3 736 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 RIN3Q8TB24 985 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 ZNF560Q96MR9 790 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 LPIN3Q9BQK8 851 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 SCNM1Q9BWG6 230 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 FGFBP2Q9BYJ0 223 aa12.07□□□□□ -0.48
CHRNA3-205ENST00000559080 EBF3Q9H4W6 596 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms