RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 SLCO1B3Q9NPD5 702 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 DNAJC17Q9NVM6 304 aaKnown RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 EBF1Q9UH73 591 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 ARHGAP26Q9UNA1 814 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PLAGL2Q9UPG8 496 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 APOBEC2Q9Y235 224 aaKnown RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 TRPM2O94759 1503 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 C2CD2LO14523 706 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 MAGEC1O60732 1142 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 DNAJA2O60884 412 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 KATNA1O75449 491 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 PRDX6P30041 224 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 MAGEA1P43355 309 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 YWHAGP61981 247 aaKnown RBP eCLIP11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 GALK2Q01415 458 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 TRIM16LQ309B1 348 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 ZDHHC24Q6UX98 284 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 FBXL6Q8N531 539 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 CDC26Q8NHZ8 85 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 TOE1Q96GM8 510 aaKnown RBP11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 FAM161BQ96MY7 647 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 TM9SF2Q99805 663 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 SYTL2Q9HCH5 934 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 ARHGEF4Q9NR80 690 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 APPL1Q9UKG1 709 aa11.52□□□□□ -0.56
SEMA4B-204ENST00000558065 CAPN1P07384 714 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF23P17027 643 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 PKLRP30613 574 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 EPS15P42566 896 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 KYNUQ16719 465 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 TRMT5Q32P41 509 aaKnown RBP11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 TANKQ92844 425 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 SLITRK6Q9H5Y7 841 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 NARFLQ9H6Q4 476 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 PCDHA4Q9UN74 947 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 CPQQ9Y646 472 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 ATP6V1G2-DDX39BF2Z307 99 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 PDE8AO60658 829 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 KLHL41O60662 606 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 FDFT1P37268 417 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 SLC1A4P43007 532 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 HCAR3P49019 387 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 PRAMEP78395 509 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 POU6F2P78424 691 aaPredicted RBP11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 TFAP4Q01664 338 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 TAF12Q16514 161 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 ASTE1Q2TB18 679 aaPredicted RBP11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 PLEKHG4Q58EX7 1191 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 UBE2UQ5VVX9 321 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 BEND5Q7L4P6 421 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 EEPD1Q7L9B9 569 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 AMIGO2Q86SJ2 522 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 GPR180Q86V85 440 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 BEGAINQ9BUH8 593 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 KANSL3Q9P2N6 904 aa11.52□□□□□ -0.57
SEMA4B-204ENST00000558065 ARHGEF35A5YM69 484 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 SMCO2A6NFE2 343 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 MSI1O43347 362 aaKnown RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 BMP10O95393 424 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 PTPREP23469 700 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 PGM1P36871 562 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 HSD17B2P37059 387 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 RALYLQ86SE5 291 aaKnown RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 KIAA2013Q8IYS2 634 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 POU5F2Q8N7G0 328 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 OXER1Q8TDS5 423 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 GDPD5Q8WTR4 605 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 SERPINB12Q96P63 405 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 RBM14Q96PK6 669 aaKnown RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 HEMGNQ9BXL5 484 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 ABCG4Q9H172 646 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 C17orf75Q9HAS0 396 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 UBA2Q9UBT2 640 aaPredicted RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 A0A1W2PQJ5 194 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 FAM172BPA6NC97 362 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 CCDC130P13994 396 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 KRT20P35900 424 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 NFE2L1Q14494 772 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF530Q6P9A1 599 aaPredicted RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 TRAF7Q6Q0C0 670 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 HSPH1Q92598 858 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 GCNAQ96QF7 691 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 ALPK1Q96QP1 1244 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF717Q9BY31 904 aaPredicted RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 SLC2A11Q9BYW1 496 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 KCNK9Q9NPC2 374 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 TMOD2Q9NZR1 351 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 SLC4A4Q9Y6R1 1079 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 MAP2P11137 1827 aaKnown RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 PARP4Q9UKK3 1724 aaKnown RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 MED1Q15648 1581 aaPredicted RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 TYW5A2RUC4 315 aaKnown RBP11.51□□□□□ -0.57
SEMA4B-204ENST00000558065 RIPK2O43353 540 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms