RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 CYP11A1P05108 521 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 CXCL8P10145 99 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 HAPLN1P10915 354 aaPredicted RBP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 HARSP12081 509 aaKnown RBP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 NPTX2P47972 431 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 RPL6Q02878 288 aaKnown RBP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 ZNF33AQ06730 810 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 CYP4F3Q08477 520 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 NR1H3Q13133 447 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 NR5A1Q13285 461 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 DMP1Q13316 513 aaPredicted RBP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 TOB2Q14106 344 aaPredicted RBP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 CPLX2Q6PUV4 134 aaKnown RBP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 LURAP1LQ8IV03 231 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 SFTPA1Q8IWL2 248 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 BAHD1Q8TBE0 780 aaPredicted RBP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 SPPL2BQ8TCT7 592 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 TCHPQ9BT92 498 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 PRORYQ9H606 182 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 POLD4Q9HCU8 107 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 UBQLN1Q9UMX0 589 aaKnown RBP11.24□□□□□ -0.61
TRAV33-201ENST00000557514 STK36Q9NRP7 1315 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 COL12A1Q99715 3063 aa11.24□□□□□ -0.61
TRAV33-201ENST00000557514 TCRBV21S2A2A0A5A6 115 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 TTC26A0AVF1 554 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 TRABD2BA6NFA1 517 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 ADAM23O75077 832 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 TOM1L1O75674 476 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 KLF8O95600 359 aaPredicted RBP11.23□□□□□ -0.61
TRAV33-201ENST00000557514 CKMP06732 381 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 TCF3P15923 654 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 RPA1P27694 616 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 KIR2DL1P43626 348 aaPredicted RBP11.23□□□□□ -0.61
TRAV33-201ENST00000557514 GUCY2FP51841 1108 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 CDR1P51861 262 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 SPAG1Q07617 926 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 MESP2Q0VG99 397 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 SMARCB1Q12824 385 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 SEZ6Q53EL9 994 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 EOGTQ5NDL2 527 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 SLC36A4Q6YBV0 504 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 SLC41A1Q8IVJ1 513 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 DAW1Q8N136 415 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 PIP4K2CQ8TBX8 421 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 SENP8Q96LD8 212 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 SLC22A12Q96S37 553 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 TNRC6BQ9UPQ9 1833 aaKnown RBP11.23□□□□□ -0.61
TRAV33-201ENST00000557514 THADAQ6YHU6 1953 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 ATG2BQ96BY7 2078 aa11.23□□□□□ -0.61
TRAV33-201ENST00000557514 TRAV19A0A0A6YYK7 116 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 CCDC169A6NNP5 214 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 XBP1P17861 261 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 PAX3P23760 479 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 EIF2DP41214 584 aaKnown RBP11.22□□□□□ -0.61
TRAV33-201ENST00000557514 PEX3P56589 373 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 LILRA4P59901 499 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 MCL1Q07820 350 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 GRIK2Q13002 908 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 KIAA1549LQ6ZVL6 1849 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 LRRTM3Q86VH5 581 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 STKLD1Q8NE28 680 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 SH3RF2Q8TEC5 729 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 ZNF274Q96GC6 653 aaPredicted RBP11.22□□□□□ -0.61
TRAV33-201ENST00000557514 TRMT2BQ96GJ1 504 aaKnown RBP11.22□□□□□ -0.61
TRAV33-201ENST00000557514 ZBTB45Q96K62 511 aaPredicted RBP11.22□□□□□ -0.61
TRAV33-201ENST00000557514 HSPA12BQ96MM6 686 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 YTHDC1Q96MU7 727 aaKnown RBP11.22□□□□□ -0.61
TRAV33-201ENST00000557514 TMEM60Q9H2L4 133 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 ABI2Q9NYB9 513 aaPredicted RBP11.22□□□□□ -0.61
TRAV33-201ENST00000557514 CALCOCO1Q9P1Z2 691 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 ARHGAP26Q9UNA1 814 aa11.22□□□□□ -0.61
TRAV33-201ENST00000557514 IGHV1OR15-9A0A0B4J2B8 117 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 NOL4O94818 638 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 CYP17A1P05093 508 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 CLTAP09496 248 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 USP17L7P0C7H9 530 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 CSH1P0DML2 217 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 CSH2P0DML3 217 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 MUTP22033 750 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 TIE1P35590 1138 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 GPR15P49685 360 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 SCRN1Q12765 414 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 PLEKHG6Q3KR16 790 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 MARCH9Q86YJ5 346 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 GALNT15Q8N3T1 639 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 DEFB119Q8N690 84 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 TTC16Q8NEE8 873 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 SPATA18Q8TC71 538 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 MYRFLQ96LU7 910 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 DCBLD2Q96PD2 775 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 ZDHHC5Q9C0B5 715 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 BHMT2Q9H2M3 363 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 LINC00597Q9H2U6 94 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 FAM124BQ9H5Z6 455 aaPredicted RBP11.21□□□□□ -0.61
TRAV33-201ENST00000557514 TRPC7Q9HCX4 862 aa11.21□□□□□ -0.61
TRAV33-201ENST00000557514 GCNT4Q9P109 453 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms