RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 KBTBD8Q8NFY9 601 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 APOL6Q9BWW8 343 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 TIMMDC1Q9NPL8 285 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 BAIAP2Q9UQB8 552 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 IRGMA1A4Y4 181 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 ARHGEF33A8MVX0 844 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 FASP25445 335 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 PSME3P61289 254 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF467Q7Z7K2 595 aaPredicted RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 SCUBE1Q8IWY4 988 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 SPAG16Q8N0X2 631 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 MYL10Q9BUA6 226 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 NUAK2Q9H093 628 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 SLC30A1Q9Y6M5 507 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 NR3C1P04150 777 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 CYP2D6P10635 497 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 CENPCQ03188 943 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 IRAK1BP1Q5VVH5 260 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 MSANTD1Q6ZTZ1 278 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 PEX5LQ8IYB4 626 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 GPT2Q8TD30 523 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 AP1S3Q96PC3 154 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF827Q17R98 1081 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 RESP18Q5W5W9 173 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 C8orf58Q8NAV2 365 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 RBBP8NLQ8NC74 664 aaPredicted RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 HEATR9A2RTY3 570 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 HSMCR30P0CW71 290 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 CAPGP40121 348 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 TOP3AQ13472 1001 aaPredicted RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 CDH18Q13634 790 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 CAMK1Q14012 370 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 LRRC36Q1X8D7 754 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 ALG11Q2TAA5 492 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 EAPPQ56P03 285 aaPredicted RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 TMEM63BQ5T3F8 832 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 MRPL4Q9BYD3 311 aaKnown RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 PNMA6FA0A0J9YX94 578 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 G3V2T6 193 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 PRMT3O60678 531 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 FDFT1P37268 417 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 RBM20Q5T481 1227 aaKnown RBP9.15□□□□□ -0.95
SYNE3-205ENST00000557275 FRMD5Q7Z6J6 570 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 TSPYL6Q8N831 410 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 CIAO1O76071 339 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 EIF3EP60228 445 aaKnown RBP9.15□□□□□ -0.95
SYNE3-205ENST00000557275 HEATR4Q86WZ0 1026 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 SPASTQ9UBP0 616 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 DISP3Q9P2K9 1392 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 TRIM43BA6NCK2 446 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 LIFRP42702 1097 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 ACADSBP45954 432 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 TCP10Q12799 353 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 PALB2Q86YC2 1186 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 ACSBG1Q96GR2 724 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 NOD2Q9HC29 1040 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 GPN1Q9HCN4 374 aaPredicted RBP9.15□□□□□ -0.95
SYNE3-205ENST00000557275 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.15□□□□□ -0.95
SYNE3-205ENST00000557275 RCOR1Q9UKL0 485 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 TTC7AQ9ULT0 858 aaPredicted RBP9.15□□□□□ -0.95
SYNE3-205ENST00000557275 DOLKQ9UPQ8 538 aa9.15□□□□□ -0.95
SYNE3-205ENST00000557275 PRPF3O43395 683 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 AHCYL1O43865 530 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PIK3CBP42338 1070 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PTK7Q13308 1070 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 DUOXA2Q1HG44 320 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 INO80DQ53TQ3 878 aaPredicted RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 SLFN13Q68D06 897 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GADL1Q6ZQY3 521 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PPP1R14BQ96C90 147 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 USP17L12C9JPN9 530 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 USP17L21D6R901 530 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 HAT1O14929 419 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 KCNN4O15554 427 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 FDX1P10109 184 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 CHN1P15882 459 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 NUDT2P50583 147 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 NCAPHQ15003 741 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ACCSLQ4AC99 568 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 REPS1Q96D71 796 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 EHD1Q9H4M9 534 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 INPP5FQ9Y2H2 1132 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ZC3H4Q9UPT8 1303 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 SLC16A3O15427 465 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 HOXD10P28358 340 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 LRPAP1P30533 357 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GPC3P51654 580 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 SPIRE1Q08AE8 756 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 TYW3Q6IPR3 259 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF677Q86XU0 584 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 SPATA4Q8NEY3 305 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 MTA3Q9BTC8 594 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 NCKIPSDQ9NZQ3 722 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 SIK3Q9Y2K2 1263 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 RUSC2Q8N2Y8 1516 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 FLT1P17948 1338 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PHGDHO43175 533 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ATP1A1P05023 1023 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms