RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ACAP3Q96P50 834 aa13.6□□□□□ -0.23
PSEN1-220ENST00000557037 OXCT2Q9BYC2 517 aaPredicted RBP13.6□□□□□ -0.23
PSEN1-220ENST00000557037 SEMA4CQ9C0C4 833 aa13.6□□□□□ -0.23
PSEN1-220ENST00000557037 TRPC7Q9HCX4 862 aa13.6□□□□□ -0.23
PSEN1-220ENST00000557037 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
PSEN1-220ENST00000557037 FLNCQ14315 2725 aa13.6□□□□□ -0.23
PSEN1-220ENST00000557037 ANKRD17O75179 2603 aaKnown RBP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 CHRM1P11229 460 aaPredicted RBP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 HARSP12081 509 aaKnown RBP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 DDX6P26196 483 aaKnown RBP eCLIP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 MAOBP27338 520 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 NAMPTP43490 491 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 SLC6A11P48066 632 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 CXADRP78310 365 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 SPAG1Q07617 926 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 DMP1Q13316 513 aaPredicted RBP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 ZNF268Q14587 947 aaPredicted RBP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 ZNF77Q15935 545 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 ZNF568Q3ZCX4 644 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 SLC39A12Q504Y0 691 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 EOGTQ5NDL2 527 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 DSTYKQ6XUX3 929 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 RHBDD1Q8TEB9 315 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 MRPS31Q92665 395 aaKnown RBP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 ERLEC1Q96DZ1 483 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 NACC1Q96RE7 527 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 CYP2S1Q96SQ9 504 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
PSEN1-220ENST00000557037 CALCOCO1Q9P1Z2 691 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 CNTN3Q9P232 1028 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 TNFSF13BQ9Y275 285 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 LRRK2Q5S007 2527 aa13.59□□□□□ -0.23
PSEN1-220ENST00000557037 UBR5O95071 2799 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-220ENST00000557037 B8ZZF3 427 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 SLC28A2O43868 658 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 KRT10P13645 584 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 GAB4Q2WGN9 574 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 NEK8Q86SG6 692 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 OR10T2Q8NGX3 314 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 BAHD1Q8TBE0 780 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-220ENST00000557037 BRF1Q92994 677 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 SLC22A12Q96S37 553 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 CDC6Q99741 560 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-220ENST00000557037 CYP8B1Q9UNU6 501 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 BTBD3Q9Y2F9 522 aa13.58□□□□□ -0.24
PSEN1-220ENST00000557037 FNDC3AQ9Y2H6 1198 aaKnown RBP13.58□□□□□ -0.24
PSEN1-220ENST00000557037 COL5A1P20908 1838 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 IGHV1OR15-9A0A0B4J2B8 117 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 BAG4O95429 457 aaKnown RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 CKMP06732 381 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 HMGA1P17096 107 aaKnown RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 IFNAR1P17181 557 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 GABRG2P18507 467 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 EFNA5P52803 228 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 CLDN6P56747 220 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 CCT2P78371 535 aaKnown RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 FAM160A1Q05DH4 1040 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 SCRN1Q12765 414 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 USP4Q13107 963 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 SMAD1Q15797 465 aaKnown RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 SEZ6Q53EL9 994 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 ZC2HC1CQ53FD0 456 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 DHRS13Q6UX07 377 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 Q6ZUG5 572 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 SLFN12Q8IYM2 578 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 SH3RF2Q8TEC5 729 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 NXPE2Q96DL1 559 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 YTHDC1Q96MU7 727 aaKnown RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 AIFM3Q96NN9 605 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 ACO2Q99798 780 aaKnown RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 FAM124BQ9H5Z6 455 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 GAREM1Q9H706 876 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 TM7SF3Q9NS93 570 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 HSFX1Q9UBD0 423 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 SUSD2Q9UGT4 822 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.57□□□□□ -0.24
PSEN1-220ENST00000557037 KCNJ14Q9UNX9 436 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 AK5Q9Y6K8 562 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 AHCTF1Q8WYP5 2266 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 OBSL1O75147 1896 aa13.57□□□□□ -0.24
PSEN1-220ENST00000557037 ERVH48-1M5A8F1 160 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 CILPO75339 1184 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 NFATC1O95644 943 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 NTRK1P04629 796 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 GNSP15586 552 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 GPR15P49685 360 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 KDSRQ06136 332 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 MYO1EQ12965 1108 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 LY6DQ14210 128 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 COLEC12Q5KU26 742 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 RNF20Q5VTR2 975 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 SDHAF4Q5VUM1 108 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 PADI6Q6TGC4 694 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 ESYT1Q9BSJ8 1104 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms