RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 RTKNQ9BST9 563 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 DDX23Q9BUQ8 820 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 PABPC3Q9H361 631 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 TP63Q9H3D4 680 aaPredicted RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 C12orf65Q9H3J6 166 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 NELFAQ9H3P2 528 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 AGO3Q9H9G7 860 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 MLXIPQ9HAP2 919 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 SPON1Q9HCB6 807 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 SEPSECSQ9HD40 501 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 UBN1Q9NPG3 1134 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 VPS45Q9NRW7 570 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 HELLSQ9NRZ9 838 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 TMOD4Q9NZQ9 345 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 IFT80Q9P2H3 777 aaPredicted RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 FEM1BQ9UK73 627 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 CNOT6Q9ULM6 557 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 NAP1L2Q9ULW6 460 aaPredicted RBP3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 ATP11BQ9Y2G3 1177 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 CDY1Q9Y6F8 540 aa3.47□□□□□ -1.85
MTHFD1-212ENST00000555858 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 A0A1B0GTL3 188 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 DRGXA6NNA5 263 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 B9A039 149 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 POLRMTO00411 1230 aaKnown RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 DCLK1O15075 740 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 HOXC11O43248 304 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 B4GALT4O60513 344 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CDC14BO60729 498 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 SNX2O60749 519 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 VPS4BO75351 444 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 PIAS2O75928 621 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 NTSR2O95665 410 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CD4P01730 458 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 FCER1AP12319 257 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 GYS1P13807 737 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CR2P20023 1033 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 LRPAP1P30533 357 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 ELF1P32519 619 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 KRT9P35527 623 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 PNLIPRP1P54315 467 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 LOXL3P58215 753 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 KRT17Q04695 432 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 SLFN5Q08AF3 891 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 KIAA2012Q0VF49 1180 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 KCNAB1Q14722 419 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CSRP2Q16527 193 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 ZNF750Q32MQ0 723 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 ZNF385BQ569K4 471 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 NOMO2Q5JPE7 1267 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 METTL24Q5JXM2 366 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 L1TD1Q5T7N2 865 aaKnown RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 ATPAF1Q5TC12 328 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CACHD1Q5VU97 1274 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 LAYNQ6UX15 382 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 C1orf122Q6ZSJ8 110 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 MED25Q71SY5 747 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CPOQ8IVL8 374 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 HERC6Q8IVU3 1022 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 ZFPM1Q8IX07 1006 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 NRSN1Q8IZ57 195 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CFAP52Q8N1V2 620 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 RILPL2Q969X0 211 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 SDCCAG3Q96C92 435 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 NEIL1Q96FI4 390 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 FAM227BQ96M60 508 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 TRIB1Q96RU8 372 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 DPYSL5Q9BPU6 564 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CPPED1Q9BRF8 314 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 TLR10Q9BXR5 811 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 SLC46A2Q9BY10 475 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 INO80BQ9C086 356 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 TTYH3Q9C0H2 523 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 PRDM8Q9NQV8 689 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 MRPS18AQ9NVS2 196 aaKnown RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 ETAA1Q9NY74 926 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 POGKQ9P215 609 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 DNMT3BQ9UBC3 853 aaKnown RBP3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 OAZ3Q9UMX2 235 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 CDYLQ9Y232 598 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 HPSEQ9Y251 543 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 KCTD3Q9Y597 815 aa3.46□□□□□ -1.86
MTHFD1-212ENST00000555858 OR2W5A6NFC9 320 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 A6NLC8 198 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 TISP43B9A030 160 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 PCDH17O14917 1159 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 DNPH1O43598 174 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 CCNT2O60583 730 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 TRIM13O60858 407 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 RNASEH2AO75792 299 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 USP1O94782 785 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 IPO13O94829 963 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 PRSS23O95084 383 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 RASAL1O95294 804 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 GCSHP23434 173 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 RPS19P39019 145 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 PXNP49023 591 aaPredicted RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 TOB1P50616 345 aaPredicted RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 PRKAA2P54646 552 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 ACTR2P61160 394 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms