RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 COLGALT2Q8IYK4 626 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 ANKRD42Q8N9B4 389 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 Q8NA96 180 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZNF384Q8TF68 577 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 SNX19Q92543 992 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 MUL1Q969V5 352 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 SNX27Q96L92 541 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 NELL2Q99435 816 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 PTDSS2Q9BVG9 487 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 TEX101Q9BY14 249 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 SMOC2Q9H3U7 446 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 GALNT9Q9HCQ5 603 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 AKIP1Q9NQ31 210 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 PARPBPQ9NWS1 579 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 SMPD4Q9NXE4 827 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 SLC39A10Q9ULF5 831 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 CAPN11Q9UMQ6 739 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 MARCH11A6NNE9 402 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 H7C4K7 107 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 PODXLO00592 558 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 TRIAP1O43715 76 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 NBNO60934 754 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 PPIFP30405 207 aaKnown RBP6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 HALP42357 657 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 PTDSS1P48651 473 aaKnown RBP6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZNF134P52741 427 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 FSTL1Q12841 308 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 ELF2Q15723 593 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 PLAG1Q6DJT9 500 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 KRT73Q86Y46 540 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 ADGRG5Q8IZF4 528 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 RNF31Q96EP0 1072 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 LTV1Q96GA3 475 aaPredicted RBP6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 GDF15Q99988 308 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZNF703Q9H7S9 590 aaPredicted RBP6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 NECTIN3Q9NQS3 549 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 CDY1Q9Y6F8 540 aa6.44□□□□□ -1.38
CKS1BP1-201ENST00000555221 A0A0B4J269 797 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 F5H697 171 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 PPFIA4O75335 1185 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 NCR1O76036 304 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 CD6P30203 668 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 CHKAP35790 457 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 NPTX2P47972 431 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 DGKEP52429 567 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 MYO1EQ12965 1108 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 TUBB3Q13509 450 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 E2F2Q14209 437 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 R3HDM1Q15032 1099 aaKnown RBP6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 CYP2A13Q16696 494 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 BEAN1Q3B7T3 259 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 CCDC38Q502W7 563 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 C4orf46Q504U0 113 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 CACHD1Q5VU97 1274 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 SP5Q6BEB4 398 aaPredicted RBP6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 FCRL6Q6DN72 434 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 MZT2AQ6P582 158 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 CCDC174Q6PII3 467 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZNF280BQ86YH2 543 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 FAM9AQ8IZU1 332 aaPredicted RBP6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 SPATA5Q8NB90 893 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 BPIFB1Q8TDL5 484 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 CCT6BQ92526 530 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 TMEM125Q96AQ2 219 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 C8orf49Q96NF6 230 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 OSBPL9Q96SU4 736 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 ALOXE3Q9BYJ1 711 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 TMEM74BQ9NUR3 256 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 DKK4Q9UBT3 224 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 TBC1D30Q9Y2I9 924 aa6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.43□□□□□ -1.38
CKS1BP1-201ENST00000555221 FAM234BA2RU67 622 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 KCNQ3O43525 872 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 RRP9O43818 475 aaKnown RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 FAM20BO75063 409 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 PIAS2O75928 621 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 CDKL5O76039 1030 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 RASAL1O95294 804 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 NDST3O95803 873 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 CSTBP04080 98 aaKnown RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 KCNA3P22001 575 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 DDX6P26196 483 aaKnown RBP eCLIP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 GABRB3P28472 473 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 BMPR1AP36894 532 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 GRK6P43250 576 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 VAV2P52735 878 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 PRKAG1P54619 331 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 CTSWP56202 376 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 FAM189BP81408 668 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 RESTQ13127 1097 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 RAPGEF1Q13905 1077 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 GEN1Q17RS7 908 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZACNQ401N2 412 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 CD300EQ496F6 205 aaPredicted RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 ARL6IP4Q66PJ3 421 aaKnown RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 SPARTQ8N0X7 666 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZNF276Q8N554 614 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 NKAPQ8N5F7 415 aaKnown RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 DVL3Q92997 716 aaPredicted RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 C20orf173Q96LM9 149 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms