RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	TSSK4	Q6SA08	328 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	ANO5	Q75V66	913 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	BRAP	Q7Z569	592 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	CATSPER3	Q86XQ3	398 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	EXOC8	Q8IYI6	725 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	TCP11	Q8WWU5	503 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	PRPF31	Q8WWY3	499 aa	Known RBP	5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	CALML4	Q96GE6	196 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	INTS4	Q96HW7	963 aa	Known RBP	5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	ZNF396	Q96N95	335 aa	Predicted RBP	5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	MTMR9	Q96QG7	549 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	JPH2	Q9BR39	696 aa	Predicted RBP	5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	GCOM2	Q9BZD3	368 aa	Predicted RBP	5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	FOXQ1	Q9C009	403 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	EPB41L4B	Q9H329	900 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	ZHX3	Q9H4I2	956 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	DDX19A	Q9NUU7	478 aa	Known RBP	5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	DLGAP2	Q9P1A6	1054 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	PADI3	Q9ULW8	664 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	ST3GAL5	Q9UNP4	418 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	DNM3	Q9UQ16	869 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	NOC2L	Q9Y3T9	749 aa	Known RBP	5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	PCDHB7	Q9Y5E2	793 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	CLIC4	Q9Y696	253 aa		5.14	□□□□□ -1.59
ATXN3-231	ENST00000554994	MTCL1	Q9Y4B5	1905 aa	Known RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	MBLAC1	A4D2B0	266 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	LRRIQ4	A6NIV6	560 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	CCDC169	A6NNP5	214 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994		E9PMD0	336 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	ETV2	O00321	342 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	LAD1	O00515	517 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	MAF	O75444	373 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	KRT38	O76015	456 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	C22orf31	O95567	290 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	SRGAP2B	P0DMP2	458 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	CRYBB1	P53674	252 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	ADAM17	P78536	824 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	CDC42EP1	Q00587	391 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	NCBP1	Q09161	790 aa	Known RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	LAMTOR4	Q0VGL1	99 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	DRP2	Q13474	957 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	TDG	Q13569	410 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	TFDP1	Q14186	410 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	EMC2	Q15006	297 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	IL17A	Q16552	155 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	NKPD1	Q17RQ9	610 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	FBXO47	Q5MNV8	452 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	RARS2	Q5T160	578 aa	Known RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	PLPP4	Q5VZY2	271 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	HAUS3	Q68CZ6	603 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	TSHZ1	Q6ZSZ6	1077 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	CATSPER4	Q7RTX7	472 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	CABP7	Q86V35	215 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	C4orf19	Q8IY42	314 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	ZDHHC14	Q8IZN3	488 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	C12orf76	Q8N812	135 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	C4orf32	Q8N8J7	132 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	RSAD2	Q8WXG1	361 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	APBB2	Q92870	758 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	ADAM2	Q99965	735 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	HSD17B14	Q9BPX1	270 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	POLR3C	Q9BUI4	534 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	INO80B	Q9C086	356 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	EPC1	Q9H2F5	836 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	BHMT2	Q9H2M3	363 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	AGO3	Q9H9G7	860 aa	Known RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	TUFT1	Q9NNX1	390 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	SEMA4G	Q9NTN9	838 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	ANKEF1	Q9NU02	776 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	WRAP73	Q9P2S5	460 aa	Predicted RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	DBR1	Q9UK59	544 aa	Known RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	DUSP12	Q9UNI6	340 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	MTMR6	Q9Y217	621 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	IGSF9B	Q9UPX0	1349 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	LOC400499	M0QZD8	3231 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	AKAP13	Q12802	2813 aa		5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	ZNF638	Q14966	1978 aa	Known RBP	5.13	□□□□□ -1.59
ATXN3-231	ENST00000554994	TENM4	Q6N022	2769 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	PDCD11	Q14690	1871 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	TMEM8B	A6NDV4	472 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	INO80B-WBP1	J3KQ70	363 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	ASAP2	O43150	1006 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	LAMTOR5	O43504	91 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	CAND2	O75155	1236 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	GPR32	O75388	356 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	ERLIN2	O94905	339 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	FAM13A	O94988	1023 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	STBD1	O95210	358 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	RPLP2	P05387	115 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	GSTP1	P09211	210 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	STAG3L1	P0CL83	205 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	XRCC6	P12956	609 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	EIF4B	P23588	611 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	ITPKA	P23677	461 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	RPA1	P27694	616 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	CA8	P35219	290 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	MATR3	P43243	847 aa	Known RBP eCLIP	5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms