RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 KCTD6Q8NC69 237 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 TWNKQ96RR1 684 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 DDX56Q9NY93 547 aaKnown RBP16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 EURLQ9NYK6 297 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 GRID1Q9ULK0 1009 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 TCRBV7S3A2A0A539 114 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 USP2O75604 605 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 NQO1P15559 274 aaKnown RBP16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 BASP1P80723 227 aaKnown RBP16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 BBS9Q3SYG4 887 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 MPZL3Q6UWV2 235 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 ECHDC2Q86YB7 292 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 FAM71DQ8N9W8 422 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 UBA3Q8TBC4 463 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 PYROXD1Q8WU10 500 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 SPATA33Q96N06 139 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 TTC25Q96NG3 672 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 GRAP2O75791 330 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 ERBB2P04626 1255 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 ABHD2P08910 425 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 EIF4BP23588 611 aaKnown RBP16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 MTFR1Q15390 333 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 ZNF667Q5HYK9 610 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 LRRC38Q5VT99 294 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.237e-11■□□□□ 10
ARHGEF40-203ENST00000554514 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 SDCBP2Q9H190 292 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 L3MBTL1Q9Y468 752 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 SSC5DA1L4H1 1573 aa16.48■□□□□ 0.23
ARHGEF40-203ENST00000554514 ABLIM1O14639 778 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 ITGB3P05106 788 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 GPX6P59796 221 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 SLC25A11Q02978 314 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 MXD4Q14582 209 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 SLC1A5Q15758 541 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 CDO1Q16878 200 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 RAB6CQ53S08 254 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 ZC3H18Q86VM9 953 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 RELL1Q8IUW5 271 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 UNC45BQ8IWX7 931 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 SLC16A10Q8TF71 515 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 GPR20Q99678 358 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 MAK16Q9BXY0 300 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 RAB6CQ9H0N0 254 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 RPF1Q9H9Y2 349 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 PCDH9Q9HC56 1237 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 ALG13Q9NP73 1137 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 RGS17Q9UGC6 210 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 PHTF1Q9UMS5 762 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 C3orf70A6NLC5 250 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 ZBTB42B2RXF5 422 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 ITGAVP06756 1048 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 KRT16P08779 473 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 KRT4P19013 534 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 POLR2BP30876 1174 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 YWHAEP62258 255 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 MMRN1Q13201 1228 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 HADHQ16836 314 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 SH3PXD2AQ5TCZ1 1133 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 HHATQ5VTY9 493 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 EFCAB12Q6NXP0 572 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 NPNTQ6UXI9 565 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 RIOX2Q8IUF8 465 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 LRRN4Q8WUT4 740 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 ELP3Q9H9T3 547 aa16.47■□□□□ 0.23
ARHGEF40-203ENST00000554514 M0QYV0 167 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 MAP3K6O95382 1288 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 ASMTLO95671 621 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 KDELR1P24390 212 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 MAP2K2P36507 400 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 SPARCL1Q14515 664 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 DRICH1Q6PGQ1 229 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 CEP128Q6ZU80 1094 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 C3orf62Q6ZUJ4 267 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 SLC35B2Q8TB61 432 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 CPT1BQ92523 772 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 CPB2Q96IY4 423 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 ZNF518BQ9C0D4 1074 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 RXFP1Q9HBX9 757 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 ALOX15BO15296 676 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 IQCF3P0C7M6 154 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 RPL22P35268 128 aaKnown RBP16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 TAP1Q03518 808 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 BNIP1Q12981 228 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 GJC2Q5T442 439 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 CDCA2Q69YH5 1023 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 RIBC1Q8N443 379 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 FBXO36Q8NEA4 188 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 LRRC8CQ8TDW0 803 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 NKD2Q969F2 451 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 FAM167AQ96KS9 214 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 FOXP3Q9BZS1 431 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 CDT1Q9H211 546 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 SIX4Q9UIU6 781 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms