RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 IL6RP08887 468 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-210ENST00000553693 CYP2C9P11712 490 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 XRCC6P12956 609 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCFD1-210ENST00000553693 JUPP14923 745 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 HSPA6P17066 643 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 CLCN2P51788 898 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 EEFSECP57772 596 aaKnown RBP5.04□□□□□ -1.6
SCFD1-210ENST00000553693 LILRA4P59901 499 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 RAB1AP62820 205 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 E2F2Q14209 437 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 FGL2Q14314 439 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 TREML2Q5T2D2 321 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 RGS7BPQ6MZT1 257 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-210ENST00000553693 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCFD1-210ENST00000553693 DIS3LQ8TF46 1054 aaKnown RBP5.04□□□□□ -1.6
SCFD1-210ENST00000553693 ATG4AQ8WYN0 398 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 AIFM3Q96NN9 605 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 SLC12A5Q9H2X9 1139 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 GLOD4Q9HC38 313 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 PIH1D1Q9NWS0 290 aaKnown RBP5.04□□□□□ -1.6
SCFD1-210ENST00000553693 SH3BP4Q9P0V3 963 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 CPA4Q9UI42 421 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 TMX2Q9Y320 296 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 NISCHQ9Y2I1 1504 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 H3BML4 177 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 LRPAP1P30533 357 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 CYP2C18P33260 490 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 WNT3P56703 355 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 GTF2H3Q13889 308 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 ZNF267Q14586 743 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-210ENST00000553693 TTF1Q15361 905 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-210ENST00000553693 DAAM2Q86T65 1068 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 LRRC71Q8N4P6 559 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 DDB2Q92466 427 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 ARMT1Q9H993 441 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 DLL3Q9NYJ7 618 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 RNF7Q9UBF6 113 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 XPR1Q9UBH6 696 aa5.03□□□□□ -1.6
SCFD1-210ENST00000553693 ZNF70Q9UC06 446 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-210ENST00000553693 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCFD1-210ENST00000553693 A0A088AWK7 358 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 AP1G1O43747 822 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 NPSP0C0P6 89 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 CERS1P27544 350 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 LIPAP38571 399 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 PDE6CP51160 858 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 ZNF81P51508 661 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 PDE1AP54750 535 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 TPTEP56180 551 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 TFF2Q03403 129 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 TMEM119Q4V9L6 283 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 PAPD7Q5XG87 772 aaKnown RBP5.02□□□□□ -1.61
SCFD1-210ENST00000553693 CELF5Q8N6W0 485 aaKnown RBP5.02□□□□□ -1.61
SCFD1-210ENST00000553693 VGLL2Q8N8G2 317 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 PLBD2Q8NHP8 589 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 RP9Q8TA86 221 aaKnown RBP5.02□□□□□ -1.61
SCFD1-210ENST00000553693 CAMKK2Q96RR4 588 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 C1QTNF7Q9BXJ2 289 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 RHOBTB2Q9BYZ6 727 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 DUSP22Q9NRW4 184 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 ZNF180Q9UJW8 692 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 SSX2IPQ9Y2D8 614 aa5.02□□□□□ -1.61
SCFD1-210ENST00000553693 ZNF213O14771 459 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 FESP07332 822 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 PDGFRBP09619 1106 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 HTR1BP28222 390 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 SLC11A2P49281 568 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 UCP3P55916 312 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 IGBP1P78318 339 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 MCL1Q07820 350 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 MGAT5BQ3V5L5 792 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 PCID2Q5JVF3 399 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 ZNF783Q6ZMS7 281 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 ZNF782Q6ZMW2 699 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-210ENST00000553693 C1QL2Q7Z5L3 287 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 SLC15A3Q8IY34 581 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 KBTBD7Q8WVZ9 684 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 JPH3Q8WXH2 748 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-210ENST00000553693 GLG1Q92896 1179 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 MRGPRX1Q96LB2 322 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 FSD1LQ9BXM9 530 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 DDX56Q9NY93 547 aaKnown RBP5.01□□□□□ -1.61
SCFD1-210ENST00000553693 NDRG4Q9ULP0 352 aaKnown RBP5.01□□□□□ -1.61
SCFD1-210ENST00000553693 ADAMTS5Q9UNA0 930 aa5.01□□□□□ -1.61
SCFD1-210ENST00000553693 SETD1BQ9UPS6 1966 aaKnown RBP5.01□□□□□ -1.61
SCFD1-210ENST00000553693 COL3A1P02461 1466 aaPredicted RBP5□□□□□ -1.61
SCFD1-210ENST00000553693 ZNF804BA4D1E1 1349 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 A0A1W2PPL8 197 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 A1L4Q6 167 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 DLDP09622 509 aaKnown RBP5□□□□□ -1.61
SCFD1-210ENST00000553693 ENGP17813 658 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 NCLP19338 710 aaKnown RBP5□□□□□ -1.61
SCFD1-210ENST00000553693 EPHB1P54762 984 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 TUBA4AP68366 448 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 PROSER3Q2NL68 480 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 SLC44A4Q53GD3 710 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 LMBRD2Q68DH5 695 aaPredicted RBP5□□□□□ -1.61
SCFD1-210ENST00000553693 MTHFD1LQ6UB35 978 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 PARS2Q7L3T8 475 aaKnown RBP5□□□□□ -1.61
SCFD1-210ENST00000553693 R3HDM4Q96D70 268 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms