RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 ZNF211Q13398 564 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PPP2R5DQ14738 602 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PFKFB3Q16875 520 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 DAB2IPQ5VWQ8 1189 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PLA2G4FQ68DD2 849 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ATG4DQ86TL0 474 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RNF168Q8IYW5 571 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CHCHD4Q8N4Q1 142 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CCDC12Q8WUD4 166 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 HDAC7Q8WUI4 952 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CRYGNQ8WXF5 182 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PHKBQ93100 1093 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LENG9Q96B70 501 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PGBD4Q96DM1 585 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 APOL6Q9BWW8 343 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TEKT3Q9BXF9 490 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 INO80BQ9C086 356 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CCDC86Q9H6F5 360 aaKnown RBP6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RSAD1Q9HA92 442 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 VPS45Q9NRW7 570 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 STK39Q9UEW8 545 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 UBR5O95071 2799 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MIA3Q5JRA6 1907 aa6.19□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ABCA12Q86UK0 2595 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SPAARA0A1B0GVQ0 90 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 F8W810 466 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 BIN1O00499 593 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NRP1O14786 923 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 FAM13AO94988 1023 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 EFEMP2O95967 443 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PDGFAP04085 211 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SOD2P04179 222 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RNASE1P07998 156 aaKnown RBP6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CPA1P15085 419 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RPL17P18621 184 aaKnown RBP6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RAB6AP20340 208 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GNA11P29992 359 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 HOXA6P31267 233 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SFNP31947 248 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CXCL12P48061 93 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GLUD2P49448 558 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CDC42EP1Q00587 391 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 EXOSC10Q01780 885 aaKnown RBP6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NECTIN1Q15223 517 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TARBP2Q15633 366 aaKnown RBP6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ADCK5Q3MIX3 580 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 XKR3Q5GH77 459 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 HEATR6Q6AI08 1181 aaKnown RBP6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ZNF852Q6ZMS4 543 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 AGMOQ6ZNB7 445 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 KBTBD6Q86V97 674 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ZNF410Q86VK4 478 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ZNF513Q8N8E2 541 aaPredicted RBP6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LSM14AQ8ND56 463 aaKnown RBP6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MDM1Q8TC05 714 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 BICD2Q8TD16 824 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RABGGTAQ92696 567 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SLC5A5Q92911 643 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TMEM143Q96AN5 459 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RPS6KC1Q96S38 1066 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GAD1Q99259 594 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RIT2Q99578 217 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SLC26A6Q9BXS9 759 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ZMYND12Q9H0C1 365 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SLKQ9H2G2 1235 aaPredicted RBP6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 C2orf42Q9NWW7 574 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MARCH5Q9NX47 278 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 VPS54Q9P1Q0 977 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 DPP7Q9UHL4 492 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 POLIQ9UNA4 740 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SRPK3Q9UPE1 567 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PCDHGA5Q9Y5G8 931 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RELNP78509 3460 aa6.18□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CCDC196A0A1B0GTZ2 297 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ESYT2A0FGR8 921 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LNP1A1A4G5 178 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CDX4O14627 284 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TGM5O43548 720 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RRP9O43818 475 aaKnown RBP6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ZNF623O75123 536 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MAFO75444 373 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TDP2O95551 362 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ABL1P00519 1130 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CD8BP10966 210 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ITGA4P13612 1032 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 FUT4P22083 530 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MZF1P28698 734 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CIITAP33076 1130 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MLH1P40692 756 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CCR10P46092 362 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SCNN1GP51170 649 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NPEPPSP55786 919 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NLRP5P59047 1200 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NTHL1P78549 312 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GSTM4Q03013 218 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 UBXN11Q5T124 520 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PCSK4Q6UW60 755 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MTSS1LQ765P7 747 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TBCKQ8TEA7 893 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms