RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MAGED2Q9UNF1 606 aaPredicted RBP14.96□□□□□ -0.01
PRPF39-204ENST00000553605 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.96□□□□□ -0.01
PRPF39-204ENST00000553605 KALRNO60229 2985 aa14.96□□□□□ -0.02
PRPF39-204ENST00000553605 A0A087WV48 116 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 CXCL8P10145 99 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 LILRA4P59901 499 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 RPL6Q02878 288 aaKnown RBP14.95□□□□□ -0.02
PRPF39-204ENST00000553605 SLCO6A1Q86UG4 719 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 NAXDQ8IW45 347 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 ERMNQ8TAM6 284 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 SPPL2BQ8TCT7 592 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 HMGB4Q8WW32 186 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 CYP2S1Q96SQ9 504 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 TMEM60Q9H2L4 133 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 BHMT2Q9H2M3 363 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 BRMS1Q9HCU9 246 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 KMT5AQ9NQR1 393 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 ARHGAP28Q9P2N2 729 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 RBM19Q9Y4C8 960 aaKnown RBP14.95□□□□□ -0.02
PRPF39-204ENST00000553605 DENND4CQ5VZ89 1909 aa14.95□□□□□ -0.02
PRPF39-204ENST00000553605 STK36Q9NRP7 1315 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 TTC26A0AVF1 554 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 SGK1O00141 431 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 XPOTO43592 962 aaKnown RBP14.94□□□□□ -0.02
PRPF39-204ENST00000553605 TOM1L1O75674 476 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 GJB3O75712 270 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 KLF8O95600 359 aaPredicted RBP14.94□□□□□ -0.02
PRPF39-204ENST00000553605 USP17L7P0C7H9 530 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 TIE1P35590 1138 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 GUCY2FP51841 1108 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 ZNF33AQ06730 810 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 CYP4F3Q08477 520 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 SMARCB1Q12824 385 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 NOLC1Q14978 699 aaKnown RBP eCLIP14.94□□□□□ -0.02
PRPF39-204ENST00000553605 TMPRSS7Q7RTY8 843 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 LRRTM3Q86VH5 581 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 SCUBE3Q8IX30 993 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 IL17RCQ8NAC3 791 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 TRPC7Q9HCX4 862 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 ABI2Q9NYB9 513 aaPredicted RBP14.94□□□□□ -0.02
PRPF39-204ENST00000553605 KIAA1522Q9P206 1035 aaPredicted RBP14.94□□□□□ -0.02
PRPF39-204ENST00000553605 RAI2Q9Y5P3 530 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 PCDH15Q96QU1 1955 aa14.94□□□□□ -0.02
PRPF39-204ENST00000553605 SHROOM3Q8TF72 1996 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 PPEF2O14830 753 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 DTNBO60941 627 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 NFATC1O95644 943 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 CYP11A1P05108 521 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 CKMP06732 381 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 CLTAP09496 248 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 CSH1P0DML2 217 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 CSH2P0DML3 217 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 MUTP22033 750 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 PAX3P23760 479 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 USP4Q13107 963 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 HSF5Q4G112 596 aaPredicted RBP14.93□□□□□ -0.02
PRPF39-204ENST00000553605 EOGTQ5NDL2 527 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 SLC36A4Q6YBV0 504 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 GLRX5Q86SX6 157 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 THEM5Q8N1Q8 247 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 SLC22A12Q96S37 553 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 TMEM206Q9H813 350 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 ZSWIM6Q9HCJ5 1215 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 STK24Q9Y6E0 443 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 TENM4Q6N022 2769 aa14.93□□□□□ -0.02
PRPF39-204ENST00000553605 NAV2Q8IVL1 2488 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 TRAV19A0A0A6YYK7 116 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 TCRBV21S2A2A0A5A6 115 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 TRABD2BA6NFA1 517 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 MYMKA6NI61 221 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 ATXN7O15265 892 aaPredicted RBP14.92□□□□□ -0.02
PRPF39-204ENST00000553605 CLDN3O15551 220 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 CDC45O75419 566 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 PPP2R3AQ06190 1150 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 MCL1Q07820 350 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 SCRN1Q12765 414 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 STRN3Q13033 797 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 ECM1Q16610 540 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 EMC10Q5UCC4 262 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 LARP1BQ659C4 914 aaKnown RBP14.92□□□□□ -0.02
PRPF39-204ENST00000553605 METTL23Q86XA0 190 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 DAW1Q8N136 415 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 STKLD1Q8NE28 680 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 SH3RF2Q8TEC5 729 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 UXTQ9UBK9 157 aaPredicted RBP14.92□□□□□ -0.02
PRPF39-204ENST00000553605 DSEQ9UL01 958 aa14.92□□□□□ -0.02
PRPF39-204ENST00000553605 PTPRBP23467 1997 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 A0A1W2PQD8 194 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 SLC16A4O15374 487 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 CBFA2T3O75081 653 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 HIP1RO75146 1068 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 TADA3O75528 432 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 MCM7P33993 719 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 MATR3P43243 847 aaKnown RBP eCLIP14.91□□□□□ -0.02
PRPF39-204ENST00000553605 ABCG1P45844 678 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 GPR15P49685 360 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 GAB4Q2WGN9 574 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 PLEKHG6Q3KR16 790 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 SPATA1Q5VX52 437 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms