RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 ELLP55199 621 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-205ENST00000553508 CNN3Q15417 329 aaKnown RBP8.17□□□□□ -1.1
PCNX1-205ENST00000553508 LMBRD2Q68DH5 695 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-205ENST00000553508 RGS7BPQ6MZT1 257 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-205ENST00000553508 ZNF280BQ86YH2 543 aa8.17□□□□□ -1.1
PCNX1-205ENST00000553508 RASAL3Q86YV0 1011 aa8.17□□□□□ -1.1
PCNX1-205ENST00000553508 WDR75Q8IWA0 830 aaKnown RBP8.17□□□□□ -1.1
PCNX1-205ENST00000553508 IL31RAQ8NI17 732 aa8.17□□□□□ -1.1
PCNX1-205ENST00000553508 PTDSS2Q9BVG9 487 aa8.17□□□□□ -1.1
PCNX1-205ENST00000553508 TMEM60Q9H2L4 133 aa8.17□□□□□ -1.1
PCNX1-205ENST00000553508 USP19O94966 1318 aa8.17□□□□□ -1.1
PCNX1-205ENST00000553508 LRRC3CA6NJW4 275 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 TMEM233B4DJY2 109 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 VIPR2P41587 438 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 CLCN2P51788 898 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 KRT17Q04695 432 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 SLC13A2Q13183 592 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 FAM153CQ494X1 144 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 AMIGO2Q86SJ2 522 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 KBTBD7Q8WVZ9 684 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 RAPGEF4Q8WZA2 1011 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 UROC1Q96N76 676 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 NDRG4Q9ULP0 352 aaKnown RBP8.16□□□□□ -1.1
PCNX1-205ENST00000553508 SHOC2Q9UQ13 582 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 SSX2IPQ9Y2D8 614 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 COX11Q9Y6N1 276 aa8.16□□□□□ -1.1
PCNX1-205ENST00000553508 FAM227AF5H4B4 570 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 MARCH6O60337 910 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 ERBB2P04626 1255 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 ARFIP2P53365 341 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 BMPR2Q13873 1038 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 E2F2Q14209 437 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 PPP4R4Q6NUP7 873 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 CCDC149Q6ZUS6 474 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 MAVSQ7Z434 540 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 ZNF575Q86XF7 245 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 KIAA0319LQ8IZA0 1049 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 ATRIPQ8WXE1 791 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 MS4A7Q9GZW8 240 aaPredicted RBP8.15□□□□□ -1.1
PCNX1-205ENST00000553508 FAM204AQ9H8W3 233 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 CPNE7Q9UBL6 633 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 ENTPD2Q9Y5L3 495 aa8.15□□□□□ -1.1
PCNX1-205ENST00000553508 GOLGA6CA6NDK9 693 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 GOLGA6BA6NDN3 693 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 C1QL1O75973 258 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 GOLGA6DP0CG33 693 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 SUMO3P55854 103 aaPredicted RBP8.14□□□□□ -1.11
PCNX1-205ENST00000553508 SATB1Q01826 763 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 GRM3Q14832 879 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 APOA5Q6Q788 366 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 ZNF764Q96H86 408 aaPredicted RBP8.14□□□□□ -1.11
PCNX1-205ENST00000553508 C22orf23Q9BZE7 217 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 ARHGEF3Q9NR81 526 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 SACM1LQ9NTJ5 587 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 GOLGA6AQ9NYA3 693 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 L1RE1Q9UN81 338 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 TBC1D30Q9Y2I9 924 aa8.14□□□□□ -1.11
PCNX1-205ENST00000553508 FNDC1Q4ZHG4 1894 aaPredicted RBP8.14□□□□□ -1.11
PCNX1-205ENST00000553508 FRMPD2Q68DX3 1309 aaPredicted RBP8.13□□□□□ -1.11
PCNX1-205ENST00000553508 A0A087WWL8 130 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 TBX3O15119 743 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 NDUFB7P17568 137 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 GPD1P21695 349 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 LIPAP38571 399 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 CCT8P50990 548 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 PLAC9Q5JTB6 97 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 TREML2Q5T2D2 321 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 DTX2Q86UW9 622 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 FAM156AQ8NDB6 213 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 NTN5Q8WTR8 489 aaPredicted RBP8.13□□□□□ -1.11
PCNX1-205ENST00000553508 ATG4AQ8WYN0 398 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 NELL1Q92832 810 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 PUS7Q96PZ0 661 aaKnown RBP8.13□□□□□ -1.11
PCNX1-205ENST00000553508 SMURF2Q9HAU4 748 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 TPCN1Q9ULQ1 816 aa8.13□□□□□ -1.11
PCNX1-205ENST00000553508 MASP2O00187 686 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 SLC16A3O15427 465 aaKnown RBP8.12□□□□□ -1.11
PCNX1-205ENST00000553508 CYP2C9P11712 490 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 BRAFP15056 766 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 ATF3P18847 181 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 EN2P19622 333 aaPredicted RBP8.12□□□□□ -1.11
PCNX1-205ENST00000553508 PPIFP30405 207 aaKnown RBP8.12□□□□□ -1.11
PCNX1-205ENST00000553508 LRPAP1P30533 357 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 ALDH9A1P49189 494 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 MYO1EQ12965 1108 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 RAB32Q13637 225 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 GFOD2Q3B7J2 385 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 ZIK1Q3SY52 487 aaPredicted RBP8.12□□□□□ -1.11
PCNX1-205ENST00000553508 DEPDC1Q5TB30 811 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 ZNF551Q7Z340 670 aaPredicted RBP8.12□□□□□ -1.11
PCNX1-205ENST00000553508 FMNL3Q8IVF7 1028 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 TTC8Q8TAM2 541 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 ANKS1AQ92625 1134 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 TIMP4Q99727 224 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 MESP1Q9BRJ9 268 aa8.12□□□□□ -1.11
PCNX1-205ENST00000553508 ARPP21Q9UBL0 812 aaPredicted RBP8.12□□□□□ -1.11
PCNX1-205ENST00000553508 TLR5O60602 858 aa8.11□□□□□ -1.11
PCNX1-205ENST00000553508 NXPH3O95157 252 aa8.11□□□□□ -1.11
PCNX1-205ENST00000553508 FESP07332 822 aa8.11□□□□□ -1.11
PCNX1-205ENST00000553508 XRCC6P12956 609 aaKnown RBP eCLIP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms