RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 BST2Q10589 180 aaKnown RBP13.41□□□□□ -0.26
CACNB3-223ENST00000552480 CLUL1Q15846 466 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 TIGD5Q53EQ6 642 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 DCUN1D2Q6PH85 259 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 DCLRE1AQ6PJP8 1040 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 CD300LGQ6UXG3 332 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 MMGT1Q8N4V1 131 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 GPR161Q8N6U8 529 aaKnown RBP13.41□□□□□ -0.26
CACNB3-223ENST00000552480 ANKRD52Q8NB46 1076 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 SPATA4Q8NEY3 305 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-223ENST00000552480 STK32AQ8WU08 396 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 ANKRD7Q92527 254 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 ALG3Q92685 438 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 MCRS1Q96EZ8 462 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 SCLYQ96I15 445 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 MCEEQ96PE7 176 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 LPIN3Q9BQK8 851 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.41□□□□□ -0.26
CACNB3-223ENST00000552480 SLC4A5Q9BY07 1137 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 C11orf49Q9H6J7 331 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-223ENST00000552480 SMARCAL1Q9NZC9 954 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 TJP2Q9UDY2 1190 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 DSEQ9UL01 958 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 TBX21Q9UL17 535 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 TTC7AQ9ULT0 858 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-223ENST00000552480 PCDHB7Q9Y5E2 793 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 PCDHA3Q9Y5H8 950 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 GOLGA8SH3BPF8 625 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 HOXA2O43364 376 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 B3GAT3O94766 335 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 CYP11A1P05108 521 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 CCDC130P13994 396 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 PTPN1P18031 435 aaKnown RBP13.4□□□□□ -0.26
CACNB3-223ENST00000552480 ADORA2BP29275 332 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 CTCFP49711 727 aaPredicted RBP13.4□□□□□ -0.26
CACNB3-223ENST00000552480 PEX5P50542 639 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 LBX1P52954 281 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 CCL23P55773 120 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 RPL7AP62424 266 aaKnown RBP13.4□□□□□ -0.26
CACNB3-223ENST00000552480 C2orf54Q08AI8 447 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 DCAF12L1Q5VU92 463 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 METTL23Q86XA0 190 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 CPNE8Q86YQ8 564 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 COLGALT2Q8IYK4 626 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 NIPA2Q8N8Q9 360 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 NOA1Q8NC60 698 aaKnown RBP13.4□□□□□ -0.26
CACNB3-223ENST00000552480 SLC35F5Q8WV83 523 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 RSPH1Q8WYR4 309 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 KRT35Q92764 455 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 SUSD3Q96L08 255 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
CACNB3-223ENST00000552480 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 CYLDQ9NQC7 956 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 TBC1D13Q9NVG8 400 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
CACNB3-223ENST00000552480 CDH9Q9ULB4 789 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 LRFN2Q9ULH4 789 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
CACNB3-223ENST00000552480 HTTP42858 3142 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 E5RJQ4 531 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 PSTPIP1O43586 416 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 DDHD2O94830 711 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 KRT3P12035 628 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 TYMPP19971 482 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 ACAT1P24752 427 aaKnown RBP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 PCSK1P29120 753 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 CYP2C18P33260 490 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 RFC2P35250 354 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 BRCC3P46736 316 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 MARCKSL1P49006 195 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 RPL34P49207 117 aaKnown RBP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 RWDD2BP57060 319 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 PDE4CQ08493 712 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 PIGHQ14442 188 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 SEL1L2Q5TEA6 688 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 PMF1Q6P1K2 205 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 TMEM110Q86TL2 294 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 ZNF280BQ86YH2 543 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 SLC2A14Q8TDB8 520 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 FNIP1Q8TF40 1166 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 RNPC3Q96LT9 517 aaKnown RBP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 FAM193BQ96PV7 902 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 NAP1L3Q99457 506 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 ST7Q9NRC1 585 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
CACNB3-223ENST00000552480 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
CACNB3-223ENST00000552480 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
CACNB3-223ENST00000552480 TULP2O00295 520 aa13.38□□□□□ -0.27
CACNB3-223ENST00000552480 XPO1O14980 1071 aaKnown RBP13.38□□□□□ -0.27
CACNB3-223ENST00000552480 B4GALT3O60512 393 aa13.38□□□□□ -0.27
CACNB3-223ENST00000552480 ATP2C2O75185 946 aa13.38□□□□□ -0.27
CACNB3-223ENST00000552480 CLTBP09497 229 aa13.38□□□□□ -0.27
CACNB3-223ENST00000552480 ACADSBP45954 432 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms