RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	SV2C	Q496J9	727 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	SLFN12L	Q6IEE8	588 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	CCDC26	Q8TAB7	109 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	LEO1	Q8WVC0	666 aa	Predicted RBP	18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	TRMT2B	Q96GJ1	504 aa	Known RBP	18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	MYRFL	Q96LU7	910 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	SLC22A12	Q96S37	553 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	FIZ1	Q96SL8	496 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	TPSD1	Q9BZJ3	242 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	TMEM206	Q9H813	350 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	TRPC7	Q9HCX4	862 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	AGO2	Q9UKV8	859 aa	Known RBP	18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	STYXL1	Q9Y6J8	313 aa		18.19	■□□□□ 0.5
CACNB3-222	ENST00000552465	ATG2B	Q96BY7	2078 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	TRAV19	A0A0A6YYK7	116 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	TMEM8B	A6NDV4	472 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	PATE3	B3GLJ2	98 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	SLC26A4	O43511	780 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	HOXB3	P14651	431 aa	Predicted RBP	18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	BCKDHB	P21953	392 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	CYP2F1	P24903	491 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	ABCD1	P33897	745 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	IRX4	P78413	519 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	USP4	Q13107	963 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	DHX8	Q14562	1220 aa	Known RBP	18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	ARL6IP4	Q66PJ3	421 aa	Known RBP	18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	CYP2U1	Q7Z449	544 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	RASSF3	Q86WH2	238 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	EFCAB13	Q8IY85	973 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	TTC16	Q8NEE8	873 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	USP33	Q8TEY7	942 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	LRRC15	Q8TF66	581 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	ACBD6	Q9BR61	282 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	LINC00597	Q9H2U6	94 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	ZHX3	Q9H4I2	956 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465	ABCB6	Q9NP58	842 aa		18.18	■□□□□ 0.5
CACNB3-222	ENST00000552465		K7EQS6	105 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	EIF5B	O60841	1220 aa	Known RBP	18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	CKM	P06732	381 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	MCTP1	Q6DN14	999 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	ANO7	Q6IWH7	933 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	CRELD2	Q6UXH1	353 aa	Predicted RBP	18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	PDCL2	Q8N4E4	241 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	ARL14EP	Q8N8R7	260 aa	Predicted RBP	18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	SH3RF2	Q8TEC5	729 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	GATA6	Q92908	595 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	CNOT6L	Q96LI5	555 aa	Known RBP	18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	ZNF560	Q96MR9	790 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	SCNM1	Q9BWG6	230 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	BLOC1S4	Q9NUP1	217 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	GCNT4	Q9P109	453 aa		18.17	■□□□□ 0.5
CACNB3-222	ENST00000552465	CEP295	Q9C0D2	2601 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	FAM208B	Q5VWN6	2430 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	SEC24B	O95487	1268 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	KRT18	P05783	430 aa	Known RBP	18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	PNPLA4	P41247	253 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	DHPS	P49366	369 aa	Predicted RBP	18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	UAP1L1	Q3KQV9	507 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	C2orf27A	Q580R0	203 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	INTS6L	Q5JSJ4	861 aa	Known RBP	18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	NT5DC4	Q86YG4	428 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	CALML4	Q96GE6	196 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	AK8	Q96MA6	479 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	PKMYT1	Q99640	499 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	DDX43	Q9NXZ2	648 aa	Known RBP	18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	GTF3C4	Q9UKN8	822 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	MYH11	P35749	1972 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	SCN1A	P35498	2009 aa		18.16	■□□□□ 0.5
CACNB3-222	ENST00000552465	C2orf78	A6NCI8	922 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	ANTXRL	A6NF34	631 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	SRRM3	A6NNA2	597 aa	Predicted RBP	18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	TBCA	O75347	108 aa	Known RBP	18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	IL18RAP	O95256	599 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	TCF3	P15923	654 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	ACAT1	P24752	427 aa	Known RBP	18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	OPRD1	P41143	372 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	SEC13	P55735	322 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	MCM6	Q14566	821 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	CCDC33	Q8N5R6	958 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	DEFB124	Q8NES8	71 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	PIGK	Q92643	395 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	ST6GALNAC4	Q9H4F1	302 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	EVL	Q9UI08	416 aa	Predicted RBP	18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	MMP17	Q9ULZ9	603 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	L1RE1	Q9UN81	338 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	AGAP1	Q9UPQ3	857 aa		18.15	■□□□□ 0.5
CACNB3-222	ENST00000552465	ANK1	P16157	1881 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	HUS1	O60921	280 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	NFATC1	O95644	943 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	HDC	P19113	662 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	ADSS	P30520	456 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	POLR2B	P30876	1174 aa	Known RBP	18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	UBA7	P41226	1012 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	MYL7	Q01449	175 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	CRY1	Q16526	586 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	TMEM86A	Q8N2M4	240 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	FSIP1	Q8NA03	581 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	MDGA1	Q8NFP4	955 aa		18.14	■□□□□ 0.49
CACNB3-222	ENST00000552465	OLIG1	Q8TAK6	271 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms