RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 CLIC6Q96NY7 704 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 CBWD1Q9BRT8 395 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 FGFBP2Q9BYJ0 223 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 TNMDQ9H2S6 317 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 DDX43Q9NXZ2 648 aaKnown RBP17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 OTOL1A6NHN0 477 aaPredicted RBP17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 ATG13O75143 517 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 PRPF40AO75400 957 aaKnown RBP17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 DRD1P21728 446 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 STAT6P42226 847 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 LIMK1P53667 647 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 RBP5P82980 135 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 GRSF1Q12849 480 aaKnown RBP eCLIP17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 SURF1Q15526 300 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 TXNDC8Q6A555 127 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 PRR23BQ6ZRT6 265 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 OSTM1Q86WC4 334 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 ADGRF2Q8IZF7 708 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 GPD1LQ8N335 351 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 CAMKK1Q8N5S9 505 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 MAB21L3Q8N8X9 362 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 GAB3Q8WWW8 586 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 USP28Q96RU2 1077 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 CUEDC2Q9H467 287 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 INTS13Q9NVM9 706 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 MTMR6Q9Y217 621 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 CACNA1BQ00975 2339 aa17.3■□□□□ 0.36
CALCOCO1-220ENST00000552282 EIF3DO15371 548 aaKnown RBP eCLIP17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 RAP1GAPP47736 663 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 GPR15P49685 360 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 MTF1Q14872 753 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 E2F4Q16254 413 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 SOWAHAQ2M3V2 549 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 PKN3Q6P5Z2 889 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 VSTM1Q6UX27 236 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 GPIHBP1Q8IV16 184 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 FAM160A2Q8N612 972 aaPredicted RBP17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 KBTBD7Q8WVZ9 684 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 EXOC4Q96A65 974 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 SPATA17Q96L03 361 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 MTMR12Q9C0I1 747 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 PDE11AQ9HCR9 933 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 PANK4Q9NVE7 773 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 KBTBD4Q9NVX7 518 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 GCNT4Q9P109 453 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 CHD8Q9HCK8 2581 aa17.29■□□□□ 0.36
CALCOCO1-220ENST00000552282 PTPRJQ12913 1337 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 EPN2O95208 641 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 ADRB1P08588 477 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 FAM163BP0C2L3 166 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 TMEM191BP0C7N4 346 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 IDEP14735 1019 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 CYP2F1P24903 491 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 SRSF5Q13243 272 aaKnown RBP17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 MAPRE1Q15691 268 aaKnown RBP17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 LPAL2Q16609 132 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 DDR2Q16832 855 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 FAM173BQ6P4H8 233 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 C4orf50Q6ZRC1 276 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 STXBP4Q6ZWJ1 553 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 CCDC65Q8IXS2 484 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 SYCP3Q8IZU3 236 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 CSGALNACT2Q8N6G5 542 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 TTC8Q8TAM2 541 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 OSCP1Q8WVF1 389 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 ANKRD36BP1Q96IX9 119 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 ZC3H10Q96K80 434 aaKnown RBP17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 TTLL2Q9BWV7 592 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 LRRC27Q9C0I9 530 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 EBF3Q9H4W6 596 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 KIAA1586Q9HCI6 787 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 TBC1D7Q9P0N9 293 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 GTF3C4Q9UKN8 822 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 CDH9Q9ULB4 789 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 PCDHGA5Q9Y5G8 931 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 SNX9Q9Y5X1 595 aa17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 CNOT1A5YKK6 2376 aaKnown RBP17.28■□□□□ 0.36
CALCOCO1-220ENST00000552282 UBE4BO95155 1302 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 USP17L7P0C7H9 530 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 WARSP23381 471 aaKnown RBP17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 GJA4P35212 333 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 PDE6CP51160 858 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 MYO1EQ12965 1108 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 SCARA3Q6AZY7 606 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 TRIM68Q6AZZ1 485 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 EPM2AIP1Q7L775 607 aaPredicted RBP17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 WDR49Q8IV35 697 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 CPA6Q8N4T0 437 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 DDX1Q92499 740 aaKnown RBP17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 ATP2A3Q93084 1043 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 TRIM9Q9C026 710 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 ECT2Q9H8V3 914 aa17.27■□□□□ 0.36
CALCOCO1-220ENST00000552282 ARHGAP26Q9UNA1 814 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 275.8 ms