RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SPP2Q13103 211 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 FOXE3Q13461 319 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 TERF2Q15554 542 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 GAGE13Q4V321 117 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 C12orf60Q5U649 245 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 VPS53Q5VIR6 699 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 CTR9Q6PD62 1173 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 ESPNLQ6ZVH7 1005 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 SKAP1Q86WV1 359 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 CLASRPQ8N2M8 674 aaKnown RBP5.81□□□□□ -1.48
SCAF11-214ENST00000550893 ZNF610Q8N9Z0 462 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 REPS2Q8NFH8 660 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 STRBPQ96SI9 672 aaKnown RBP5.81□□□□□ -1.48
SCAF11-214ENST00000550893 OSBPL6Q9BZF3 934 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 PORCNQ9H237 461 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 ECHDC1Q9NTX5 307 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 USP36Q9P275 1121 aaKnown RBP5.81□□□□□ -1.48
SCAF11-214ENST00000550893 PI4KBQ9UBF8 816 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 MORF4L1Q9UBU8 362 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 GJD2Q9UKL4 321 aa5.81□□□□□ -1.48
SCAF11-214ENST00000550893 TRANK1O15050 2925 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 A0A0D9SFI3 127 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 UBE2QL1A1L167 161 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 CAPN14A8MX76 684 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 AKAP8O43823 692 aaKnown RBP5.8□□□□□ -1.48
SCAF11-214ENST00000550893 HMMRO75330 724 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 VSIG10L2P0DP72 767 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 GSPT1P15170 499 aaKnown RBP5.8□□□□□ -1.48
SCAF11-214ENST00000550893 VCAM1P19320 739 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 ACRV1P26436 265 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 HOXA7P31268 230 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-214ENST00000550893 LSP1P33241 339 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 KIR2DL3P43628 341 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 BACE1P56817 501 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 SEPT2Q15019 361 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 FAM110CQ1W6H9 321 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 HSP90AB4PQ58FF6 505 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 KRT40Q6A162 431 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 GIMAP6Q6P9H5 292 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 CCDC129Q6ZRS4 1044 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 ZNF589Q86UQ0 364 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-214ENST00000550893 C11orf74Q86VG3 221 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 C1orf210Q8IVY1 113 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 SLC16A11Q8NCK7 471 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 IL17DQ8TAD2 202 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 FERMT2Q96AC1 680 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 ZNF503Q96F45 646 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 HIST1H2AHQ96KK5 128 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 HIST1H2AJQ99878 128 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 DHX36Q9H2U1 1008 aaKnown RBP5.8□□□□□ -1.48
SCAF11-214ENST00000550893 EMC7Q9NPA0 242 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 IL23AQ9NPF7 189 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 SRRDQ9UH36 339 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 SERPINB13Q9UIV8 391 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 MAPRE3Q9UPY8 281 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.8□□□□□ -1.48
SCAF11-214ENST00000550893 PCDHB6Q9Y5E3 794 aa5.8□□□□□ -1.48
SCAF11-214ENST00000550893 TTC41PQ6P2S7 1318 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 PRSS38A1L453 326 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 GPAA1O43292 621 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 FSBPO95073 299 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 JUNP05412 331 aaKnown RBP5.79□□□□□ -1.48
SCAF11-214ENST00000550893 PFKMP08237 780 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 ASNSP08243 561 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 IFIT2P09913 472 aaKnown RBP5.79□□□□□ -1.48
SCAF11-214ENST00000550893 EN2P19622 333 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-214ENST00000550893 MX1P20591 662 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 NOVP48745 357 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 PDE1AP54750 535 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 MAN2A1Q16706 1144 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 MIIPQ5JXC2 388 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 MAP3K21Q5TCX8 1036 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 BROXQ5VW32 411 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 TMED8Q6PL24 325 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-214ENST00000550893 FAM111BQ6SJ93 734 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 GADL1Q6ZQY3 521 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 PPP1R14CQ8TAE6 165 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 TRIB2Q92519 343 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 HOOK2Q96ED9 719 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 ERO1AQ96HE7 468 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 FAM227BQ96M60 508 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 P2RX7Q99572 595 aaKnown RBP5.79□□□□□ -1.48
SCAF11-214ENST00000550893 TCF25Q9BQ70 676 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 SCAND2PQ9GZW5 306 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-214ENST00000550893 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCAF11-214ENST00000550893 FLRT1Q9NZU1 646 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 USP18Q9UMW8 372 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 PTPRSQ13332 1948 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 KIAA1217Q5T5P2 1943 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 VCANP13611 3396 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 DOCK5Q9H7D0 1870 aa5.79□□□□□ -1.48
SCAF11-214ENST00000550893 FZD7O75084 574 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 BAG3O95817 575 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 C1SP09871 688 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 GAAP10253 952 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 PSMC4P43686 418 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 FLT3LGP49771 235 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 DGCR2P98153 550 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 NUCB1Q02818 461 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 CD69Q07108 199 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms