RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 SPTBN2O15020 2390 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 TULP1O00294 542 aaPredicted RBP15.26■□□□□ 0.03
TPCN1-213ENST00000550543 RHOBTB1O94844 696 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 EPN2O95208 641 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 CKMP06732 381 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 KRT19P08727 400 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 IDEP14735 1019 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 TCF3P15923 654 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 AMPD3Q01432 767 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 KCNB1Q14721 858 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 MTF1Q14872 753 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 GPIHBP1Q8IV16 184 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 ADGRF2Q8IZF7 708 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 GPD1LQ8N335 351 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 C1orf127Q8N9H9 656 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 LRRC15Q8TF66 581 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 EPSTI1Q96J88 318 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 HPS4Q9NQG7 708 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 DUS2Q9NX74 493 aaKnown RBP15.26■□□□□ 0.03
TPCN1-213ENST00000550543 L1RE1Q9UN81 338 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 SNX9Q9Y5X1 595 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 CACNA1BQ00975 2339 aa15.26■□□□□ 0.03
TPCN1-213ENST00000550543 ZNF233A6NK53 670 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 TISP43B9A030 160 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 AXIN1O15169 862 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 NFATC1O95644 943 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 APBB3O95704 486 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 FAM163BP0C2L3 166 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 ANXA13P27216 316 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 RAP1GAPP47736 663 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 DMWDQ09019 674 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 DUOXA2Q1HG44 320 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 TXNDC8Q6A555 127 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 FSTL4Q6MZW2 842 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 SYT13Q7L8C5 426 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 TMEM150AQ86TG1 271 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 TMEM130Q8N3G9 435 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 CD101Q93033 1021 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 ZC3H10Q96K80 434 aaKnown RBP15.25■□□□□ 0.03
TPCN1-213ENST00000550543 SPATA17Q96L03 361 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 SMG9Q9H0W8 520 aaKnown RBP15.25■□□□□ 0.03
TPCN1-213ENST00000550543 CUEDC2Q9H467 287 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 ECT2Q9H8V3 914 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 TRPC7Q9HCX4 862 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 VPS45Q9NRW7 570 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 PANK4Q9NVE7 773 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 FBXO2Q9UK22 296 aaPredicted RBP15.25■□□□□ 0.03
TPCN1-213ENST00000550543 CDH9Q9ULB4 789 aa15.25■□□□□ 0.03
TPCN1-213ENST00000550543 EPG5Q9HCE0 2579 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 FRMD3A2A2Y4 597 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 MYMKA6NI61 221 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 SLC9A3R1O14745 358 aaPredicted RBP15.24■□□□□ 0.03
TPCN1-213ENST00000550543 GABRDO14764 452 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 TRIM66O15016 1216 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 RNF40O75150 1001 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 SNRPFP62306 86 aaKnown RBP15.24■□□□□ 0.03
TPCN1-213ENST00000550543 GRIN1Q05586 938 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 DNAJC19Q96DA6 116 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 SAAL1Q96ER3 474 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 CNTNAP3BQ96NU0 1288 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 CNTNAP3Q9BZ76 1288 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 ZSCAN16Q9H4T2 348 aaPredicted RBP15.24■□□□□ 0.03
TPCN1-213ENST00000550543 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
TPCN1-213ENST00000550543 EBF1Q9UH73 591 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 ARHGAP26Q9UNA1 814 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 CCL26Q9Y258 94 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 FRYLO94915 3013 aa15.24■□□□□ 0.03
TPCN1-213ENST00000550543 TSC2P49815 1807 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 CYP2F1P24903 491 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 GJA4P35212 333 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 USP4Q13107 963 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 SRSF5Q13243 272 aaKnown RBP15.23■□□□□ 0.03
TPCN1-213ENST00000550543 CUL4AQ13619 759 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 ZNF77Q15935 545 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 DDR2Q16832 855 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 DDX42Q86XP3 938 aaKnown RBP eCLIP15.23■□□□□ 0.03
TPCN1-213ENST00000550543 SCN4BQ8IWT1 228 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 NOC3LQ8WTT2 800 aaKnown RBP15.23■□□□□ 0.03
TPCN1-213ENST00000550543 HPDLQ96IR7 371 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 MTMR12Q9C0I1 747 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 ARRDC1-AS1Q9H2J1 176 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 TNMDQ9H2S6 317 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 INTS13Q9NVM9 706 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 TRPM5Q9NZQ8 1165 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 TBC1D7Q9P0N9 293 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 GTF3C4Q9UKN8 822 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 CLIC4Q9Y696 253 aa15.23■□□□□ 0.03
TPCN1-213ENST00000550543 EIF3DO15371 548 aaKnown RBP eCLIP15.22■□□□□ 0.03
TPCN1-213ENST00000550543 CD2BP2O95400 341 aaKnown RBP15.22■□□□□ 0.03
TPCN1-213ENST00000550543 EGFP01133 1207 aa15.22■□□□□ 0.03
TPCN1-213ENST00000550543 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
TPCN1-213ENST00000550543 ARSAP15289 507 aa15.22■□□□□ 0.03
TPCN1-213ENST00000550543 HDCP19113 662 aa15.22■□□□□ 0.03
TPCN1-213ENST00000550543 GALK1P51570 392 aa15.22■□□□□ 0.03
TPCN1-213ENST00000550543 SLC39A14Q15043 492 aa15.22■□□□□ 0.03
TPCN1-213ENST00000550543 HSF5Q4G112 596 aaPredicted RBP15.22■□□□□ 0.03
TPCN1-213ENST00000550543 PREPLQ4J6C6 727 aaPredicted RBP15.22■□□□□ 0.03
TPCN1-213ENST00000550543 USP39Q53GS9 565 aaKnown RBP15.22■□□□□ 0.03
TPCN1-213ENST00000550543 WDR44Q5JSH3 913 aa15.22■□□□□ 0.03
TPCN1-213ENST00000550543 TRIM68Q6AZZ1 485 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms