RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 PCDH19Q8TAB3 1148 aa7.23□□□□□ -1.25
UBE2N-204ENST00000549833 INPP4AQ96PE3 977 aaPredicted RBP7.23□□□□□ -1.25
UBE2N-204ENST00000549833 DEFB118Q96PH6 123 aa7.23□□□□□ -1.25
UBE2N-204ENST00000549833 MXRA8Q9BRK3 442 aa7.23□□□□□ -1.25
UBE2N-204ENST00000549833 WDR11Q9BZH6 1224 aa7.23□□□□□ -1.25
UBE2N-204ENST00000549833 IRF2BPLQ9H1B7 796 aa7.23□□□□□ -1.25
UBE2N-204ENST00000549833 FOXP1Q9H334 677 aaPredicted RBP7.23□□□□□ -1.25
UBE2N-204ENST00000549833 JADE2Q9NQC1 790 aa7.23□□□□□ -1.25
UBE2N-204ENST00000549833 DDX20Q9UHI6 824 aaKnown RBP7.23□□□□□ -1.25
UBE2N-204ENST00000549833 DSEQ9UL01 958 aa7.23□□□□□ -1.25
UBE2N-204ENST00000549833 FAM184BQ9ULE4 1060 aa7.23□□□□□ -1.25
UBE2N-204ENST00000549833 IGLV3-22A0A075B6J6 115 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 MYADML2A6NDP7 307 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
UBE2N-204ENST00000549833 STX6O43752 255 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 SLC37A4O43826 429 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 STAM2O75886 525 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 RASGRP1O95267 797 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 PGK1P00558 417 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 SRGAP2CP0DJJ0 459 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 RARBP10826 455 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 PDCP20941 246 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 UBA1P22314 1058 aaKnown RBP7.22□□□□□ -1.25
UBE2N-204ENST00000549833 U2AF2P26368 475 aaKnown RBP eCLIP7.22□□□□□ -1.254e-6■□□□□ 10.9
UBE2N-204ENST00000549833 ICAM3P32942 547 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 CIITAP33076 1130 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 AFF3P51826 1226 aaKnown RBP7.22□□□□□ -1.25
UBE2N-204ENST00000549833 NKX3-2P78367 333 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 SP2Q02086 613 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 PKP1Q13835 747 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 DUSP28Q4G0W2 176 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 CEP55Q53EZ4 464 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 PRR16Q569H4 304 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 IQSEC1Q6DN90 963 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 CCDC62Q6P9F0 684 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 CD300LDQ6UXZ3 194 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 NEK8Q86SG6 692 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 TLK2Q86UE8 772 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 PLA2G4DQ86XP0 818 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 NOSTRINQ8IVI9 506 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 SCFD2Q8WU76 684 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 GJA10Q969M2 543 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 TOE1Q96GM8 510 aaKnown RBP7.22□□□□□ -1.25
UBE2N-204ENST00000549833 PWWP2AQ96N64 755 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 CATSPERZQ9NTU4 200 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 DDX56Q9NY93 547 aaKnown RBP7.22□□□□□ -1.25
UBE2N-204ENST00000549833 MTMR6Q9Y217 621 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 TELO2Q9Y4R8 837 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 SYNRGQ9UMZ2 1314 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 SIP14410 1827 aa7.22□□□□□ -1.25
UBE2N-204ENST00000549833 TRIP11Q15643 1979 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 CCDC66A2RUB6 948 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 NKRFO15226 690 aaKnown RBP eCLIP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 FIBPO43427 364 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 CCNT1O60563 726 aaKnown RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 ATP9AO75110 1047 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 DUSP11O75319 330 aaKnown RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 RFPL3O75679 317 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 SGPL1O95470 568 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 GGPS1O95749 300 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 GH1P01241 217 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 TFRCP02786 760 aaKnown RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 GJB1P08034 283 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 PYGMP11217 842 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 MYCLP1P12525 358 aaPredicted RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 KCNA2P16389 499 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 EN2P19622 333 aaPredicted RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 STAT5AP42229 794 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 TOB1P50616 345 aaPredicted RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 SOX10P56693 466 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 BEX3Q00994 111 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 SP4Q02446 784 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 ARHGAP1Q07960 439 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 RESTQ13127 1097 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 ITGB3BPQ13352 177 aaPredicted RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 MTMR1Q13613 665 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 ZNF174Q15697 407 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 GPR19Q15760 415 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 CRY1Q16526 586 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 PLEKHG6Q3KR16 790 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 TTC38Q5R3I4 469 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 C16orf59Q7L2K0 433 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 THNSL2Q86YJ6 484 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 C1QL4Q86Z23 238 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 OR6J1Q8NGC5 347 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 U2AF1L4Q8WU68 220 aaKnown RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 DACT3Q96B18 629 aaPredicted RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 LENG9Q96B70 501 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 UPF3AQ9H1J1 476 aaKnown RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 AGO4Q9HCK5 861 aaKnown RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 TRIM39Q9HCM9 518 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 XPNPEP3Q9NQH7 507 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 KCNH7Q9NS40 1196 aa7.21□□□□□ -1.26
UBE2N-204ENST00000549833 DDX25Q9UHL0 483 aaKnown RBP7.21□□□□□ -1.26
UBE2N-204ENST00000549833 CYP3A7-CYP3A51PA0A087WV96 503 aa7.2□□□□□ -1.26
UBE2N-204ENST00000549833 DDX39AO00148 427 aaKnown RBP7.2□□□□□ -1.26
UBE2N-204ENST00000549833 CTAGE5O15320 804 aa7.2□□□□□ -1.26
UBE2N-204ENST00000549833 MSH4O15457 936 aa7.2□□□□□ -1.26
UBE2N-204ENST00000549833 PLA2G1BP04054 148 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms