RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 ZNF707Q96C28 371 aaPredicted RBP10.23□□□□□ -0.77
RAB5B-205ENST00000549034 HEXIM2Q96MH2 286 aaKnown RBP10.23□□□□□ -0.77
RAB5B-205ENST00000549034 PKMYT1Q99640 499 aa10.23□□□□□ -0.77
RAB5B-205ENST00000549034 MED10Q9BTT4 135 aa10.23□□□□□ -0.77
RAB5B-205ENST00000549034 NT5C1AQ9BXI3 368 aa10.23□□□□□ -0.77
RAB5B-205ENST00000549034 CISHQ9NSE2 258 aa10.23□□□□□ -0.77
RAB5B-205ENST00000549034 HCFC1R1Q9NWW0 138 aa10.23□□□□□ -0.77
RAB5B-205ENST00000549034 DNMT3BQ9UBC3 853 aaKnown RBP10.23□□□□□ -0.77
RAB5B-205ENST00000549034 TRANK1O15050 2925 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 CLDN5O00501 218 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 CILPO75339 1184 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 BDNFP23560 247 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 PON1P27169 355 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 HOXA9P31269 272 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 GPR15P49685 360 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 COPB1P53618 953 aaKnown RBP10.22□□□□□ -0.77
RAB5B-205ENST00000549034 YWHAEP62258 255 aaKnown RBP10.22□□□□□ -0.77
RAB5B-205ENST00000549034 RPL10AP62906 217 aaKnown RBP10.22□□□□□ -0.77
RAB5B-205ENST00000549034 TPM4P67936 248 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 NTHL1P78549 312 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 PLD1Q13393 1074 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 IQCB1Q15051 598 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 SMAD2Q15796 467 aaKnown RBP10.22□□□□□ -0.77
RAB5B-205ENST00000549034 DDR2Q16832 855 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 CCDC142Q17RM4 750 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 TJAP1Q5JTD0 557 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 FKBP15Q5T1M5 1219 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 SDHAF4Q5VUM1 108 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 PHLDB3Q6NSJ2 640 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 DNAJB7Q7Z6W7 309 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-205ENST00000549034 ARHGEF19Q8IW93 802 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 HS6ST3Q8IZP7 471 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 GPR152Q8TDT2 470 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 WHAMMQ8TF30 809 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 SUSD6Q92537 303 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 MYLPFQ96A32 169 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 PCED1BQ96HM7 432 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 TMEM176AQ96HP8 235 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 RPGRIP1Q96KN7 1286 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 NECTIN4Q96NY8 510 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 TWNKQ96RR1 684 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 ARID3AQ99856 593 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 CORO1BQ9BR76 489 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 B3GNT5Q9BYG0 378 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 RHOBTB2Q9BYZ6 727 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 ELOVL4Q9GZR5 314 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 POMKQ9H5K3 350 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 CBX8Q9HC52 389 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 GCNT4Q9P109 453 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 CEP72Q9P209 647 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 HSFX1Q9UBD0 423 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 HMGXB4Q9UGU5 601 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 LIMA1Q9UHB6 759 aaKnown RBP10.22□□□□□ -0.77
RAB5B-205ENST00000549034 YIPF1Q9Y548 306 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 PCDHB4Q9Y5E5 795 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 C2orf16Q68DN1 1984 aa10.22□□□□□ -0.77
RAB5B-205ENST00000549034 GTPBP10A4D1E9 387 aaKnown RBP10.21□□□□□ -0.77
RAB5B-205ENST00000549034 LRRC10BA6NIK2 292 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 GOLGA6L19H0YKK7 550 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 CAVIN2O95810 425 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 MYL4P12829 197 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 ZNF18P17022 549 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 SP100P23497 879 aaPredicted RBP10.21□□□□□ -0.77
RAB5B-205ENST00000549034 FSHRP23945 695 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 RAD23BP54727 409 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 MFAP3P55082 362 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 APBA1Q02410 837 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 INCA1Q0VD86 236 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 KCNMA1Q12791 1236 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 VEPH1Q14D04 833 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 ARHGAP44Q17R89 818 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 CYP4A22Q5TCH4 519 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 GJB7Q6PEY0 223 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 TRIM65Q6PJ69 517 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 LRSAM1Q6UWE0 723 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 ITIH5Q86UX2 942 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 LUZP1Q86V48 1076 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 C12orf29Q8N999 325 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 KAT5Q92993 513 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 CYFIP2Q96F07 1278 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 FUBP3Q96I24 572 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAB5B-205ENST00000549034 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.77
RAB5B-205ENST00000549034 PHF7Q9BWX1 381 aaPredicted RBP10.21□□□□□ -0.77
RAB5B-205ENST00000549034 HSD3B7Q9H2F3 369 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 TSPY26PQ9H489 355 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 WDR6Q9NNW5 1121 aaKnown RBP10.21□□□□□ -0.77
RAB5B-205ENST00000549034 ABCB6Q9NP58 842 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 FAM49BQ9NUQ9 324 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 ASB3Q9Y575 518 aa10.21□□□□□ -0.77
RAB5B-205ENST00000549034 MYO10Q9HD67 2058 aa10.21□□□□□ -0.78
RAB5B-205ENST00000549034 RNF225M0QZC1 329 aaPredicted RBP10.2□□□□□ -0.78
RAB5B-205ENST00000549034 STK25O00506 426 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 ATP8B3O60423 1300 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 PAPLNO95428 1278 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 RHOP08100 348 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 ATP1A3P13637 1013 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 KRT5P13647 590 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 CCDC130P13994 396 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 CD19P15391 556 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms