RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 LEMD2Q8NC56 503 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 LINC00301Q8NCQ3 95 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 IFT74Q96LB3 600 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 PLIN2Q99541 437 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 TRIM6Q9C030 488 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-217ENST00000548420 SMG9Q9H0W8 520 aaKnown RBP15.2■□□□□ 0.02
PTCH1-217ENST00000548420 DNAJC25Q9H1X3 360 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 EBF3Q9H4W6 596 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 TMEM189-UBE2V1I3L0A0 370 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 DPYSL4O14531 572 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 VNN2O95498 520 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 EDN1P05305 212 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 HSP90AA1P07900 732 aaKnown RBP15.19■□□□□ 0.02
PTCH1-217ENST00000548420 NPTX2P47972 431 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 ZRSR1Q15695 479 aaKnown RBP15.19■□□□□ 0.02
PTCH1-217ENST00000548420 LYSMD4Q5XG99 296 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 SLC27A1Q6PCB7 646 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 KCNN1Q92952 543 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 CALML4Q96GE6 196 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 CDK5RAP3Q96JB5 506 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 DRC1Q96MC2 740 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 CLIC6Q96NY7 704 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 ARHGAP28Q9P2N2 729 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 PLXND1Q9Y4D7 1925 aa15.19■□□□□ 0.02
PTCH1-217ENST00000548420 TRIP11Q15643 1979 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 B3GAT3O94766 335 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 THP07101 528 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 ATXN1LP0C7T5 689 aaKnown RBP15.18■□□□□ 0.02
PTCH1-217ENST00000548420 KRT10P13645 584 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 ARSAP15289 507 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 PLCG1P19174 1290 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 DDIT3P35638 169 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 CLCNKBP51801 687 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 CEBPZQ03701 1054 aaKnown RBP15.18■□□□□ 0.02
PTCH1-217ENST00000548420 SLC14A1Q13336 389 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 PKP1Q13835 747 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 FBXO43Q4G163 708 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 DEFB119Q8N690 84 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 RIN3Q8TB24 985 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 DEPTORQ8TB45 409 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 SPIRE2Q8WWL2 714 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 ACDQ96AP0 544 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 P2RY13Q9BPV8 354 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 KIFC3Q9BVG8 833 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 TMEM134Q9H6X4 195 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 KCNG1Q9UIX4 513 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 FBXL5Q9UKA1 691 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 PCOLCE2Q9UKZ9 415 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 TBX20Q9UMR3 447 aa15.18■□□□□ 0.02
PTCH1-217ENST00000548420 RBM19Q9Y4C8 960 aaKnown RBP15.18■□□□□ 0.02
PTCH1-217ENST00000548420 NBPF19A0A087WUL8 3843 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 PPP6R2O75170 966 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 F13A1P00488 732 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 CSRP3P50461 194 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 PEX3P56589 373 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 MRPL58Q14197 206 aaKnown RBP15.17■□□□□ 0.02
PTCH1-217ENST00000548420 MAP7D1Q3KQU3 841 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 GPR158Q5T848 1215 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 NT5DC1Q5TFE4 455 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 ATL3Q6DD88 541 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 TMEM92Q6UXU6 159 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 TAS1R3Q7RTX0 852 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 PDCD7Q8N8D1 485 aaKnown RBP15.17■□□□□ 0.02
PTCH1-217ENST00000548420 KRI1Q8N9T8 703 aaKnown RBP15.17■□□□□ 0.02
PTCH1-217ENST00000548420 RAD54LQ92698 747 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 ZNF396Q96N95 335 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-217ENST00000548420 CRISPLD1Q9H336 500 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 PDZD7Q9H5P4 517 aa15.17■□□□□ 0.02
PTCH1-217ENST00000548420 TFIP11Q9UBB9 837 aaKnown RBP15.17■□□□□ 0.02
PTCH1-217ENST00000548420 SFI1A8K8P3 1242 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 K7ERI5 159 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 N4BP3O15049 544 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 SLC28A2O43868 658 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 YEATS4O95619 227 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 PLS3P13797 630 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 ZNF131P52739 623 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 PSMD2Q13200 908 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 DMP1Q13316 513 aaPredicted RBP15.16■□□□□ 0.02
PTCH1-217ENST00000548420 PRPF4BQ13523 1007 aaKnown RBP15.16■□□□□ 0.02
PTCH1-217ENST00000548420 MCM6Q14566 821 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 TPGS2Q68CL5 300 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 RNF19BQ6ZMZ0 732 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 SPRYD3Q8NCJ5 442 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 CEP76Q8TAP6 659 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 GOLGA2P5Q9HBQ8 144 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 KCNK4Q9NYG8 393 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 ODF2LQ9ULJ1 636 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 YIPF1Q9Y548 306 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 FLNCQ14315 2725 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 PHLPP2Q6ZVD8 1323 aa15.16■□□□□ 0.02
PTCH1-217ENST00000548420 CREBBPQ92793 2442 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 NPHP3-ACAD11A0A0J9YXS1 232 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 CCDC169A6NNP5 214 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 ERVH48-1M5A8F1 160 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 SPTLC2O15270 562 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 GJA4P35212 333 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 HOXD12P35452 270 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms