RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 VSTM1Q6UX27 236 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 TMC5Q6UXY8 1006 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 RRAGAQ7L523 313 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 ACOT1Q86TX2 421 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 C12orf76Q8N812 135 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 SUSD6Q92537 303 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 SMG7Q92540 1137 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 ZNF707Q96C28 371 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 RIPOR3Q96MK2 946 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 NECTIN4Q96NY8 510 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 TWNKQ96RR1 684 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 SEPT5Q99719 369 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 CRISPLD1Q9H336 500 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 SIX2Q9NPC8 291 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 CCL16O15467 120 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 SLC34A2O95436 690 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 ACO1P21399 889 aaKnown RBP12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 RAD23BP54727 409 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 EPHB3P54753 998 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 UBXN1Q04323 297 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 TWF1Q12792 350 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 CBX2Q14781 532 aaPredicted RBP12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 SMAD2Q15796 467 aaKnown RBP12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 PTCRAQ6ISU1 281 aaPredicted RBP12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 TTC9BQ8N6N2 239 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 TMEM176AQ96HP8 235 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 CEP295NLQ96MC4 621 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 KREMEN1Q96MU8 473 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 ERGIC2Q96RQ1 377 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 ANP32EQ9BTT0 268 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 APOL5Q9BWW9 433 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 B3GNT5Q9BYG0 378 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 PIDD1Q9HB75 910 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 UBE2TQ9NPD8 197 aaPredicted RBP12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 PLCB1Q9NQ66 1216 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 SLC27A5Q9Y2P5 690 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 DAAM1Q9Y4D1 1078 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 USP15Q9Y4E8 981 aaPredicted RBP12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 ASB3Q9Y575 518 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 MYO10Q9HD67 2058 aa12.1□□□□□ -0.47
CALCOCO1-208ENST00000547988 TRIM66O15016 1216 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 SERPINC1P01008 464 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 PAEPP09466 180 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 BDNFP23560 247 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 CYP2F1P24903 491 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 RPL10AP62906 217 aaKnown RBP12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 ORC1Q13415 861 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 VEPH1Q14D04 833 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 ZNF394Q53GI3 561 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 KLHDC7AQ5VTJ3 777 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 DPY19L2P1Q6NXN4 242 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 TMEM270Q6UE05 265 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 ITIH5Q86UX2 942 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 FUKQ8N0W3 1084 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 SLC4A11Q8NBS3 891 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 KAT5Q92993 513 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 SMARCD1Q96GM5 515 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 HNRNPABQ99729 332 aaKnown RBP12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 LSM14BQ9BX40 385 aaKnown RBP12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 KIAA1257Q9ULG3 409 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 CNTN6Q9UQ52 1028 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 SIK3Q9Y2K2 1263 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 PCDHB4Q9Y5E5 795 aa12.09□□□□□ -0.47
CALCOCO1-208ENST00000547988 A0A1B0GTH6 734 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 SOAT2O75908 522 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 CCDC130P13994 396 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 UCHL3P15374 230 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 PTPN2P17706 415 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 ATF6P18850 670 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 KCNQ1P51787 676 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZNF132P52740 706 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 APBA1Q02410 837 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 SYCP1Q15431 976 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 IQCEQ6IPM2 695 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 GJB7Q6PEY0 223 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 FAM35AQ86V20 835 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 LEMD2Q8NC56 503 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 RBBP8NLQ8NC74 664 aaPredicted RBP12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 SLC2A14Q8TDB8 520 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 SHC3Q92529 594 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 PSMG2Q969U7 264 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZNF512Q96ME7 567 aaPredicted RBP12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 ASB2Q96Q27 587 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 LPIN3Q9BQK8 851 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 MED10Q9BTT4 135 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZNF518BQ9C0D4 1074 aa12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 WDR6Q9NNW5 1121 aaKnown RBP12.08□□□□□ -0.48
CALCOCO1-208ENST00000547988 AVENQ9NQS1 362 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms