RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 CD101Q93033 1021 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 CYFIP2Q96F07 1278 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 TRIM11Q96F44 468 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 RAD9AQ99638 391 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 NXF3Q9H4D5 531 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 FAM153AQ9UHL3 310 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 SIX4Q9UIU6 781 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 ADAM21Q9UKJ8 722 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 NR2E1Q9Y466 385 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 MUC3AQ02505 3323 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 GOLGA6L10A0A0M3HER8 536 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 GNA15P30679 374 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 NSFP46459 744 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 MARCKSL1P49006 195 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 CUL1Q13616 776 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 TMEM132DQ14C87 1099 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 PPP2R5EQ16537 467 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 ALS2CLQ60I27 953 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 TRIM72Q6ZMU5 477 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 ADAT2Q7Z6V5 191 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 RTN4RL1Q86UN2 441 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 MICALL1Q8N3F8 863 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 TSEN2Q8NCE0 465 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 WHAMMQ8TF30 809 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 APBB2Q92870 758 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 GAS2L1Q99501 681 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 XYLT2Q9H1B5 865 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 AVENQ9NQS1 362 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 CCDC66A2RUB6 948 aa17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 BHMG1C9JSJ3 638 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 ENPP3O14638 875 aa17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 CTNNA2P26232 953 aa17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 CENPCQ03188 943 aa17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 UBXN11Q5T124 520 aa17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 AADACL2Q6P093 401 aa17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 TOP1MTQ969P6 601 aa17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 PCDHA3Q9Y5H8 950 aa17.53■□□□□ 0.4
CHMP1A-204ENST00000547687 LINC01553A4QN01 128 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 ITGB3P05106 788 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 CTNNA1P35221 906 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 GUCY2FP51841 1108 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 ZNF699Q32M78 642 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 SEL1L2Q5TEA6 688 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 CXorf38Q8TB03 319 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 RIN2Q8WYP3 895 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 KIF12Q96FN5 646 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 APOL6Q9BWW8 343 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 C2CD2Q9Y426 696 aa17.52■□□□□ 0.4
CHMP1A-204ENST00000547687 TTI1O43156 1089 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 THAP12O43422 761 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 MGEA5O60502 916 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 HSF2BPO75031 334 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 RNF40O75150 1001 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 CFHP08603 1231 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 RRM1P23921 792 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 AKAP5P24588 427 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 HLTFQ14527 1009 aaKnown RBP eCLIP17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 CPNE8Q86YQ8 564 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 CD302Q8IX05 232 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 PLEKHA5Q9HAU0 1116 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 ANAPC7Q9UJX3 599 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 BRWD1Q9NSI6 2320 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 RALGAPA2Q2PPJ7 1873 aa17.52■□□□□ 0.39
CHMP1A-204ENST00000547687 CUL9Q8IWT3 2517 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 KIAA1671Q9BY89 1806 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 RPS6KA5O75582 802 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 PYGMP11217 842 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 YARSP54577 528 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 LIN9Q5TKA1 542 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 PHLDB2Q86SQ0 1253 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 DDX42Q86XP3 938 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 PASD1Q8IV76 773 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 MREGQ8N565 214 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 UBR7Q8N806 425 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 EXOC4Q96A65 974 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 SNX27Q96L92 541 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 ZMAT2Q96NC0 199 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 C17orf80Q9BSJ5 609 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 NIF3L1Q9GZT8 377 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 ERVK-5Q9HDB9 667 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 PRDM6Q9NQX0 595 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 ST3GAL5Q9UNP4 418 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 UTP11Q9Y3A2 253 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 INSL6Q9Y581 213 aa17.51■□□□□ 0.39
CHMP1A-204ENST00000547687 RECQL4O94761 1208 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 NOMO3P69849 1222 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 TWF2Q6IBS0 349 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 MON1BQ7L1V2 547 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 NT5DC4Q86YG4 428 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 RNF19AQ9NV58 838 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 DPP3Q9NY33 737 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 NXF1Q9UBU9 619 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 COL4A6Q14031 1691 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 RPLP2P05387 115 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms