RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 KRT31Q15323 416 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 MDH1BQ5I0G3 518 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 PHLDB3Q6NSJ2 640 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 TRIM65Q6PJ69 517 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 PAQR9Q6ZVX9 377 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 OTOP3Q7RTS5 596 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 GRASPQ7Z6J2 395 aaPredicted RBP15.4■□□□□ 0.06
DDX54-203ENST00000546869 ACOT1Q86TX2 421 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 DHX40Q8IX18 779 aaKnown RBP15.4■□□□□ 0.06
DDX54-203ENST00000546869 PLCD3Q8N3E9 789 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 TTC9BQ8N6N2 239 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 ANKRD20A12PQ8NF67 263 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 TMEM176AQ96HP8 235 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 SPATA17Q96L03 361 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 C8orf48Q96LL4 319 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 SEPT5Q99719 369 aaPredicted RBP15.4■□□□□ 0.06
DDX54-203ENST00000546869 HNRNPABQ99729 332 aaKnown RBP15.4■□□□□ 0.06
DDX54-203ENST00000546869 LRRC3Q9BY71 257 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 B3GNT5Q9BYG0 378 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 ELOVL4Q9GZR5 314 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.4■□□□□ 0.06
DDX54-203ENST00000546869 GCNT4Q9P109 453 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 CDH22Q9UJ99 828 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 KIAA1257Q9ULG3 409 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 CNTN6Q9UQ52 1028 aa15.4■□□□□ 0.06
DDX54-203ENST00000546869 TRIM66O15016 1216 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 TPM2P07951 284 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 RHOP08100 348 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 CSH1P0DML2 217 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 CSH2P0DML3 217 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 CD58P19256 250 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 ACO1P21399 889 aaKnown RBP15.39■□□□□ 0.05
DDX54-203ENST00000546869 PON1P27169 355 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 RAD23BP54727 409 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 LRMPQ12912 555 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 VEPH1Q14D04 833 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 PABPC1LQ4VXU2 614 aaKnown RBP15.39■□□□□ 0.05
DDX54-203ENST00000546869 HSP90AA4PQ58FG1 418 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 PRSS36Q5K4E3 855 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 CYP4A22Q5TCH4 519 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 DNAJB7Q7Z6W7 309 aaPredicted RBP15.39■□□□□ 0.05
DDX54-203ENST00000546869 ZDHHC14Q8IZN3 488 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 AOPEPQ8N6M6 819 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 SLC4A11Q8NBS3 891 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 ADAMTS19Q8TE59 1207 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 MYRFLQ96LU7 910 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 TWNKQ96RR1 684 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 ARID3AQ99856 593 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 HMGXB4Q9UGU5 601 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 ATP8B3O60423 1300 aa15.39■□□□□ 0.05
DDX54-203ENST00000546869 SOBPA7XYQ1 873 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 PAEPP09466 180 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 SLC9A1P19634 815 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 CDK11BP21127 795 aaKnown RBP15.38■□□□□ 0.05
DDX54-203ENST00000546869 BDNFP23560 247 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 FSHRP23945 695 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 MFAP3P55082 362 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 CCDC142Q17RM4 750 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 ARHGAP17Q68EM7 881 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 DPY19L2P1Q6NXN4 242 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 APTXQ7Z2E3 356 aaKnown RBP15.38■□□□□ 0.05
DDX54-203ENST00000546869 TMC8Q8IU68 726 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 FUKQ8N0W3 1084 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 PPM1KQ8N3J5 372 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 ACSF2Q96CM8 615 aaPredicted RBP15.38■□□□□ 0.05
DDX54-203ENST00000546869 CYFIP2Q96F07 1278 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 TRMT2BQ96GJ1 504 aaKnown RBP15.38■□□□□ 0.05
DDX54-203ENST00000546869 LPIN3Q9BQK8 851 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 CORO1BQ9BR76 489 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 CRACR2AQ9BSW2 395 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 CSNK1G1Q9HCP0 422 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 ASAH2Q9NR71 780 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 HCFC1R1Q9NWW0 138 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 EPS15L1Q9UBC2 864 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 APEX2Q9UBZ4 518 aa15.38■□□□□ 0.05
DDX54-203ENST00000546869 BECN2A8MW95 431 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 SOAT2O75908 522 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 NOL4O94818 638 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 HMGA1P17096 107 aaKnown RBP15.37■□□□□ 0.05
DDX54-203ENST00000546869 GRIK1P39086 918 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 COPB1P53618 953 aaKnown RBP15.37■□□□□ 0.05
DDX54-203ENST00000546869 KCNMA1Q12791 1236 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 DDR2Q16832 855 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 PDZD4Q76G19 769 aaPredicted RBP15.37■□□□□ 0.05
DDX54-203ENST00000546869 RRAGAQ7L523 313 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 FAM35AQ86V20 835 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 ARHGEF19Q8IW93 802 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 GJD3Q8N144 294 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 C12orf29Q8N999 325 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 FAM200AQ8TCP9 573 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 SMARCD1Q96GM5 515 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 HEXIM2Q96MH2 286 aaKnown RBP15.37■□□□□ 0.05
DDX54-203ENST00000546869 KREMEN1Q96MU8 473 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 UHRF1Q96T88 793 aaPredicted RBP15.37■□□□□ 0.05
DDX54-203ENST00000546869 ZNF518BQ9C0D4 1074 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 GPR88Q9GZN0 384 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 SIX2Q9NPC8 291 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 UBE2TQ9NPD8 197 aaPredicted RBP15.37■□□□□ 0.05
DDX54-203ENST00000546869 PLCB1Q9NQ66 1216 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms