RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NOTCH4Q99466 2003 aa21.8■■□□□ 1.08
HMGA2-211ENST00000545998 MYH10P35580 1976 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 SOAT2O75908 522 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 LRG1P02750 347 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 CYP2F1P24903 491 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 KCNQ1P51787 676 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 RAD23BP54727 409 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 TPM4P67936 248 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 CYP27A1Q02318 531 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 MGAT5BQ3V5L5 792 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 ZNF394Q53GI3 561 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 FKBP15Q5T1M5 1219 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 GJB7Q6PEY0 223 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 C12orf29Q8N999 325 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 SLC4A11Q8NBS3 891 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 SMG7Q92540 1137 aaKnown RBP21.79■■□□□ 1.08
HMGA2-211ENST00000545998 SEPT5Q99719 369 aaPredicted RBP21.79■■□□□ 1.08
HMGA2-211ENST00000545998 B3GNT5Q9BYG0 378 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 DENND4AQ7Z401 1863 aa21.79■■□□□ 1.08
HMGA2-211ENST00000545998 GOLGA6L19H0YKK7 550 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 XYLBO75191 536 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 MAGEA11P43364 429 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 ALDH1A3P47895 512 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 PLD1Q13393 1074 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 ATAT1Q5SQI0 421 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 JAKMIP2Q96AA8 810 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 TMEM176AQ96HP8 235 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 FAM81BQ96LP2 452 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 RIPOR3Q96MK2 946 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 CLDN5O00501 218 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 BDNFP23560 247 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 MTHFRP42898 656 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 CBX2Q14781 532 aaPredicted RBP21.78■■□□□ 1.08
HMGA2-211ENST00000545998 SMAD2Q15796 467 aaKnown RBP21.78■■□□□ 1.08
HMGA2-211ENST00000545998 PAQR9Q6ZVX9 377 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 ENOSF1Q7L5Y1 443 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.78■■□□□ 1.08
HMGA2-211ENST00000545998 ASB2Q96Q27 587 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 DNAI2Q9GZS0 605 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 CEP72Q9P209 647 aa21.78■■□□□ 1.08
HMGA2-211ENST00000545998 MUC3AQ02505 3323 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 ATF6P18850 670 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 TRIM21P19474 475 aaKnown RBP21.77■■□□□ 1.08
HMGA2-211ENST00000545998 MFAP3P55082 362 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 UBXN1Q04323 297 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 KLHDC7AQ5VTJ3 777 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 VSTM1Q6UX27 236 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 FUKQ8N0W3 1084 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 NECTIN4Q96NY8 510 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 LSM14BQ9BX40 385 aaKnown RBP21.77■■□□□ 1.08
HMGA2-211ENST00000545998 ZNF518BQ9C0D4 1074 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 PIDD1Q9HB75 910 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 PLCB1Q9NQ66 1216 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 RTN4Q9NQC3 1192 aaKnown RBP21.77■■□□□ 1.08
HMGA2-211ENST00000545998 FAM49BQ9NUQ9 324 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 CNTN6Q9UQ52 1028 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 FAM50BQ9Y247 325 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 PCDHB4Q9Y5E5 795 aa21.77■■□□□ 1.08
HMGA2-211ENST00000545998 TCF20Q9UGU0 1960 aaKnown RBP21.77■■□□□ 1.08
HMGA2-211ENST00000545998 GREB1Q4ZG55 1949 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 CCDC130P13994 396 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 GPR15P49685 360 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 EPHB3P54753 998 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 TMEM270Q6UE05 265 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 GRASPQ7Z6J2 395 aaPredicted RBP21.76■■□□□ 1.07
HMGA2-211ENST00000545998 SLC2A14Q8TDB8 520 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 HEXIM2Q96MH2 286 aaKnown RBP21.76■■□□□ 1.07
HMGA2-211ENST00000545998 ERGIC2Q96RQ1 377 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 HCFC1R1Q9NWW0 138 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 DNMT3BQ9UBC3 853 aaKnown RBP21.76■■□□□ 1.07
HMGA2-211ENST00000545998 AJAP1Q9UKB5 411 aaPredicted RBP21.76■■□□□ 1.07
HMGA2-211ENST00000545998 SIK3Q9Y2K2 1263 aa21.76■■□□□ 1.07
HMGA2-211ENST00000545998 A0A1B0GTH6 734 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 RNF225M0QZC1 329 aaPredicted RBP21.75■■□□□ 1.07
HMGA2-211ENST00000545998 IL9P15248 144 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 KLK7P49862 253 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 ZNF132P52740 706 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 CACNA2D1P54289 1103 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 SYCP1Q15431 976 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 DDR2Q16832 855 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 FAM35AQ86V20 835 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 ELMOD1Q8N336 334 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 NAP1L5Q96NT1 182 aaPredicted RBP21.75■■□□□ 1.07
HMGA2-211ENST00000545998 HNRNPABQ99729 332 aaKnown RBP21.75■■□□□ 1.07
HMGA2-211ENST00000545998 MED10Q9BTT4 135 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 POMKQ9H5K3 350 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 WDR6Q9NNW5 1121 aaKnown RBP21.75■■□□□ 1.07
HMGA2-211ENST00000545998 TMEM30AQ9NV96 361 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 DNAJC12Q9UKB3 198 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 ASB3Q9Y575 518 aa21.75■■□□□ 1.07
HMGA2-211ENST00000545998 TEX33O43247 280 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 BMP1P13497 986 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 RPL10AP62906 217 aaKnown RBP21.74■■□□□ 1.07
HMGA2-211ENST00000545998 FILIP1LQ4L180 1135 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 IQCEQ6IPM2 695 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 SCN4BQ8IWT1 228 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 RBBP8NLQ8NC74 664 aaPredicted RBP21.74■■□□□ 1.07
HMGA2-211ENST00000545998 GPR152Q8TDT2 470 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 PSMG2Q969U7 264 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 CYFIP2Q96F07 1278 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms