RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 PTK7Q13308 1070 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 SNX17Q15036 470 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 PTPROQ16827 1216 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 LONRF2Q1L5Z9 754 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 SLC10A6Q3KNW5 377 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 WDR72Q3MJ13 1102 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 CRTC2Q53ET0 693 aaPredicted RBP7.47□□□□□ -1.21
SPPL3-209ENST00000545209 SEL1L2Q5TEA6 688 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 CYP4F22Q6NT55 531 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 MON1BQ7L1V2 547 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 HDXQ7Z353 690 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 PHF13Q86YI8 300 aaPredicted RBP7.47□□□□□ -1.21
SPPL3-209ENST00000545209 PASD1Q8IV76 773 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 HACE1Q8IYU2 909 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 RASGEF1CQ8N431 466 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 BEST2Q8NFU1 509 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 C1orf216Q8TAB5 229 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 CPA5Q8WXQ8 436 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 HPDLQ96IR7 371 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 SNX27Q96L92 541 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 ZSWIM1Q9BR11 485 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 BCO2Q9BYV7 579 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 ZNF518BQ9C0D4 1074 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 UPF3AQ9H1J1 476 aaKnown RBP7.47□□□□□ -1.21
SPPL3-209ENST00000545209 RUBCNLQ9H714 662 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 RBM12Q9NTZ6 932 aaKnown RBP7.47□□□□□ -1.21
SPPL3-209ENST00000545209 DPP3Q9NY33 737 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 SMARCAL1Q9NZC9 954 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 OGFRQ9NZT2 677 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 ADAM22Q9P0K1 906 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 STIM2Q9P246 746 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 SIX4Q9UIU6 781 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 ANAPC7Q9UJX3 599 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 TTC7AQ9ULT0 858 aaPredicted RBP7.47□□□□□ -1.21
SPPL3-209ENST00000545209 COG5Q9UP83 839 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 PIN4Q9Y237 131 aaKnown RBP7.47□□□□□ -1.21
SPPL3-209ENST00000545209 NOC2LQ9Y3T9 749 aaKnown RBP7.47□□□□□ -1.21
SPPL3-209ENST00000545209 ALG6Q9Y672 507 aa7.47□□□□□ -1.21
SPPL3-209ENST00000545209 FAM170AA1A519 330 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 MYO1FO00160 1098 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 TLR3O15455 904 aaKnown RBP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 DDX3YO15523 660 aaKnown RBP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 ZRANB2O95218 330 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 CALCAP01258 141 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 THBS1P07996 1170 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 WEE2P0C1S8 567 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 COMTP21964 271 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 FGFR4P22455 802 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 RRM1P23921 792 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 BRD2P25440 801 aaKnown RBP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 CTNNA2P26232 953 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 HOXA11P31270 313 aaPredicted RBP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 HOXC8P31273 242 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 SLC1A1P43005 524 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 SEC13P55735 322 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 RNASE9P60153 205 aaKnown RBP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 SP3Q02447 781 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 TAP1Q03518 808 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 GPS2Q13227 327 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 GAS6Q14393 721 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 LBRQ14739 615 aaKnown RBP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 MMS22LQ6ZRQ5 1243 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 IFT20Q8IY31 132 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 KRT222Q8N1A0 295 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 TRPV1Q8NER1 839 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 ZNF606Q8WXB4 792 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 TRIB2Q92519 343 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 CYFIP2Q96F07 1278 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 RNPC3Q96LT9 517 aaKnown RBP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 KRT12Q99456 494 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 C11orf70Q9BRQ4 267 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 LRRC1Q9BTT6 524 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 SLITRK6Q9H5Y7 841 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 PARVAQ9NVD7 372 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 ZNF446Q9NWS9 450 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 EHD2Q9NZN4 543 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 STRIP2Q9ULQ0 834 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 POLIQ9UNA4 740 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 AGAP1Q9UPQ3 857 aa7.46□□□□□ -1.22
SPPL3-209ENST00000545209 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPPL3-209ENST00000545209 RECQL4O94761 1208 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 TOMM70O94826 608 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 SEC31AO94979 1220 aaKnown RBP7.45□□□□□ -1.22
SPPL3-209ENST00000545209 HEXIM1O94992 359 aaKnown RBP7.45□□□□□ -1.22
SPPL3-209ENST00000545209 CD4P01730 458 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 FGGP02679 453 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 MMP8P22894 467 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 TNFRSF8P28908 595 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 CTGFP29279 349 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 CDH5P33151 784 aaPredicted RBP7.45□□□□□ -1.22
SPPL3-209ENST00000545209 MAN1A1P33908 653 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 CTNNA1P35221 906 aaKnown RBP7.45□□□□□ -1.22
SPPL3-209ENST00000545209 CETN2P41208 172 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 TNNT3P45378 269 aaPredicted RBP7.45□□□□□ -1.22
SPPL3-209ENST00000545209 RAP1GAPP47736 663 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 RWDD2BP57060 319 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 NKX3-2P78367 333 aa7.45□□□□□ -1.22
SPPL3-209ENST00000545209 MRPS6P82932 125 aaKnown RBP7.45□□□□□ -1.22
SPPL3-209ENST00000545209 ZNF200P98182 395 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms