RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 FHL2Q14192 279 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 E2F2Q14209 437 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 SF3B3Q15393 1217 aaKnown RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 INSCQ1MX18 579 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 PLA1AQ53H76 456 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 TEDDM1Q5T9Z0 273 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 HECTD2Q5U5R9 776 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 KSR2Q6VAB6 950 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 NOL8Q76FK4 1167 aaKnown RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 DPP9Q86TI2 863 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 DTX2Q86UW9 622 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 SESTD1Q86VW0 696 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 MPP5Q8N3R9 675 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 SDR16C5Q8N3Y7 309 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.88□□□□□ -1.95
YBX3-214ENST00000544501 IPCEF1Q8WWN9 437 aaPredicted RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 LPIN2Q92539 896 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 CAVIN3Q969G5 261 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 SPSB4Q96A44 273 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 SORCS2Q96PQ0 1159 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 ALG8Q9BVK2 526 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 COLEC11Q9BWP8 271 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 BRIP1Q9BX63 1249 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 TPSD1Q9BZJ3 242 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 TTYH3Q9C0H2 523 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 MS4A7Q9GZW8 240 aaPredicted RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 ZNF700Q9H0M5 742 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 DHX36Q9H2U1 1008 aaKnown RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 PNPLA8Q9NP80 782 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 KLC4Q9NSK0 619 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 WDR33Q9C0J8 1336 aaKnown RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 A0A087X1B8 175 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 LOC102723971A0A1B0GUV8 181 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 WDR27A2RRH5 827 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 APAF1O14727 1248 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 PMM2O15305 246 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 AKAP8O43823 692 aaKnown RBP2.87□□□□□ -1.95
YBX3-214ENST00000544501 ORC4O43929 436 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 PLIN1O60240 522 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 TLR5O60602 858 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 RAMP2O60895 175 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 TXNP10599 105 aaKnown RBP2.87□□□□□ -1.95
YBX3-214ENST00000544501 KCNA3P22001 575 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 ADRA1BP35368 520 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 CASP5P51878 434 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 HNRNPMP52272 730 aaKnown RBP eCLIP2.87□□□□□ -1.954e-7■■■■■ 27.2
YBX3-214ENST00000544501 DGKEP52429 567 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 LILRA4P59901 499 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 RPS16P62249 146 aaKnown RBP2.87□□□□□ -1.95
YBX3-214ENST00000544501 MRPS35P82673 323 aaKnown RBP2.87□□□□□ -1.95
YBX3-214ENST00000544501 FOXI1Q12951 378 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 MYO1EQ12965 1108 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 DAG1Q14118 895 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 MAP9Q49MG5 647 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 C3orf38Q5JPI3 329 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 VPS53Q5VIR6 699 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 DCAF12L1Q5VU92 463 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 YAF2Q8IY57 180 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 SLC44A3Q8N4M1 653 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 BEND2Q8NDZ0 799 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 OR56A3Q8NH54 315 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 MYCBPAPQ8TBZ2 947 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 FBXL20Q96IG2 436 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 PPP1R9BQ96SB3 815 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 TTPALQ9BTX7 342 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 APOL5Q9BWW9 433 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 NAA15Q9BXJ9 866 aaKnown RBP2.87□□□□□ -1.95
YBX3-214ENST00000544501 ACTRT3Q9BYD9 372 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 SCAND2PQ9GZW5 306 aaPredicted RBP2.87□□□□□ -1.95
YBX3-214ENST00000544501 TMPRSS5Q9H3S3 457 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 SERHLQ9NQF3 203 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 NDRG4Q9ULP0 352 aaKnown RBP2.87□□□□□ -1.95
YBX3-214ENST00000544501 PADI4Q9UM07 663 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 SH2B3Q9UQQ2 575 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 FAM50BQ9Y247 325 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 SSX2IPQ9Y2D8 614 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 SNX13Q9Y5W8 968 aa2.87□□□□□ -1.95
YBX3-214ENST00000544501 TMEM233B4DJY2 109 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 RASSF9O75901 435 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 NXPH3O95157 252 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ONECUT2O95948 504 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 MT-ND5P03915 603 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 SLPIP03973 132 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ANXA2P07355 339 aaKnown RBP2.86□□□□□ -1.95
YBX3-214ENST00000544501 IL1R1P14778 569 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 PROZP22891 400 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 PIK3CBP42338 1070 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 TM4SF4P48230 202 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 AK2P54819 239 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 HTRA4P83105 476 aaPredicted RBP2.86□□□□□ -1.95
YBX3-214ENST00000544501 KRT17Q04695 432 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ZNF543Q08ER8 600 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 NPY5RQ15761 445 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ERCC6LQ2NKX8 1250 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 PLAC9Q5JTB6 97 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ZNF618Q5T7W0 954 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ARHGAP40Q5TG30 622 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 KAZNQ674X7 775 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 PCSK4Q6UW60 755 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms