RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CBWD1Q9BRT8 395 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 NACA2Q9H009 215 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 NDUFA13Q9P0J0 144 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 RABGEF1Q9UJ41 708 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 FAF1Q9UNN5 650 aaPredicted RBP13.27□□□□□ -0.29
SMG8-202ENST00000543872 LZTS1Q9Y250 596 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 LDHCP07864 332 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 PMLP29590 882 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 PRKD1Q15139 912 aaPredicted RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 HIF1AQ16665 826 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 DNAL1Q4LDG9 190 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 FAM71AQ8IYT1 594 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 ZFP28Q8NHY6 868 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 CIDEBQ9UHD4 219 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 PACSIN3Q9UKS6 424 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 PCDHGB4Q9UN71 923 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 PCDHGB5Q9Y5G0 923 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 EIF3DO15371 548 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMG8-202ENST00000543872 TFAP2AP05549 437 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 ADSSP30520 456 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 HOXA13P31271 388 aaPredicted RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 PPIDQ08752 370 aaKnown RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 QRICH1Q2TAL8 776 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 ANKRD20A4Q4UJ75 823 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 TMCO4Q5TGY1 634 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 STXBP4Q6ZWJ1 553 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMG8-202ENST00000543872 CNBD2Q96M20 576 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 TMEM121Q9BTD3 319 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 LRP5O75197 1615 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 ANKRD36CQ5JPF3 1778 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 LSM1O15116 133 aaKnown RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 TM9SF1O15321 606 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 MSH4O15457 936 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 GLRA2P23416 452 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 IRX4P78413 519 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 GSTO1P78417 241 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 ITGA9Q13797 1035 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 TCHHL1Q5QJ38 904 aaPredicted RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 INTS5Q6P9B9 1019 aaKnown RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 PASD1Q8IV76 773 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 PRICKLE1Q96MT3 831 aaPredicted RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 P2RX7Q99572 595 aaKnown RBP13.26□□□□□ -0.29
SMG8-202ENST00000543872 DMAC2Q9NW81 257 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 PLA2G4CQ9UP65 541 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
SMG8-202ENST00000543872 CLUHO75153 1309 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 K7ENM7 598 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 RAG1P15918 1043 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 RFX1P22670 979 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 PHBP35232 272 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 HOXD12P35452 270 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 SERPINB8P50452 374 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 MFAP3P55082 362 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
SMG8-202ENST00000543872 MYLK3Q32MK0 819 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 EFHC2Q5JST6 749 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 NANOGNBQ7Z5D8 188 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 ATP11CQ8NB49 1132 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 SERAC1Q96JX3 654 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 DHRS1Q96LJ7 313 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 PRPF18Q99633 342 aaKnown RBP13.25□□□□□ -0.29
SMG8-202ENST00000543872 SLC13A1Q9BZW2 595 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 LIN28AQ9H9Z2 209 aaKnown RBP13.25□□□□□ -0.29
SMG8-202ENST00000543872 DYNLT1P63172 113 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 IKQ13123 557 aaPredicted RBP13.25□□□□□ -0.29
SMG8-202ENST00000543872 KLF1Q13351 362 aaPredicted RBP13.25□□□□□ -0.29
SMG8-202ENST00000543872 MSS51Q4VC12 460 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 SEPT12Q8IYM1 358 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 GAB3Q8WWW8 586 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 SEMA4DQ92854 862 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 MRPL1Q9BYD6 325 aaKnown RBP13.25□□□□□ -0.29
SMG8-202ENST00000543872 FOXP3Q9BZS1 431 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 LOC100653049A0A140TA62 436 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 DENND3A2RUS2 1198 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 KRT34O76011 436 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 ZFXP17010 805 aaPredicted RBP13.25□□□□□ -0.29
SMG8-202ENST00000543872 GTF2H1P32780 548 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 CCR3P51677 355 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 FAAP100Q0VG06 881 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 BST1Q10588 318 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 KCTD21Q4G0X4 260 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 KLHL35Q6PF15 583 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 UGT2A3Q6UWM9 527 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 CLEC4GQ6UXB4 293 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 C1orf186Q6ZWK4 172 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 TRIM50Q86XT4 487 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 METTL25Q8N6Q8 603 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 FBXO36Q8NEA4 188 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 SH2D3AQ9BRG2 576 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 C11orf70Q9BRQ4 267 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 GPAMQ9HCL2 828 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 PFDN4Q9NQP4 134 aa13.25□□□□□ -0.29
SMG8-202ENST00000543872 SAE1Q9UBE0 346 aaPredicted RBP13.25□□□□□ -0.29
SMG8-202ENST00000543872 A0A088AWK7 358 aa13.24□□□□□ -0.29
SMG8-202ENST00000543872 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
SMG8-202ENST00000543872 H3BSA7 217 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms