RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CDC23Q9UJX2 597 aa12.24□□□□□ -0.45
COPS7A-217ENST00000543537 GUCA1BQ9UMX6 200 aa12.24□□□□□ -0.45
COPS7A-217ENST00000543537 ANKRD62A6NC57 917 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 EFCAB8A8MWE9 144 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 CES2O00748 559 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 STAU1O95793 577 aaKnown RBP12.23□□□□□ -0.45
COPS7A-217ENST00000543537 FAM163BP0C2L3 166 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 TMEM191BP0C7N4 346 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 MYBL1P10243 752 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 PLA2G5P39877 138 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 PIK3CAP42336 1068 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 ACOT2P49753 483 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 PDE6CP51160 858 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 DLG4P78352 724 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 SIGLEC14Q08ET2 396 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 ELAVL2Q12926 359 aaKnown RBP12.23□□□□□ -0.45
COPS7A-217ENST00000543537 RARS2Q5T160 578 aaKnown RBP12.23□□□□□ -0.45
COPS7A-217ENST00000543537 PAPD7Q5XG87 772 aaKnown RBP12.23□□□□□ -0.45
COPS7A-217ENST00000543537 ELMSAN1Q6PJG2 1045 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 C12orf76Q8N812 135 aaPredicted RBP12.23□□□□□ -0.45
COPS7A-217ENST00000543537 CTNNBL1Q8WYA6 563 aaPredicted RBP12.23□□□□□ -0.45
COPS7A-217ENST00000543537 PIK3R5Q8WYR1 880 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 VCPIP1Q96JH7 1222 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 ACAP3Q96P50 834 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 AGPAT1Q99943 283 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 PAAF1Q9BRP4 392 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 CDT1Q9H211 546 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 VRTNQ9H8Y1 702 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 CYP3A43Q9HB55 503 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 RAPGEFL1Q9UHV5 662 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 CDH22Q9UJ99 828 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 KIAA1257Q9ULG3 409 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 DENND4AQ7Z401 1863 aa12.23□□□□□ -0.45
COPS7A-217ENST00000543537 C2CD4DB7Z1M9 353 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 FOXN3O00409 490 aaPredicted RBP12.22□□□□□ -0.45
COPS7A-217ENST00000543537 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
COPS7A-217ENST00000543537 RTN2O75298 545 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 TADA2AO75478 443 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 KIF4AO95239 1232 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 GLUD1P00367 558 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 HLA-DRAP01903 254 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 TMEM253P0C7T8 217 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 MCM3P25205 808 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 CA8P35219 290 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 HADHBP55084 474 aaKnown RBP12.22□□□□□ -0.45
COPS7A-217ENST00000543537 ARID5AQ03989 594 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 NCOA4Q13772 614 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 CCDC70Q6NSX1 233 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 HFE2Q6ZVN8 426 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 ZNF571Q7Z3V5 609 aaPredicted RBP12.22□□□□□ -0.45
COPS7A-217ENST00000543537 PLCD3Q8N3E9 789 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 SLC30A5Q8TAD4 765 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 ASIC4Q96FT7 647 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 UROC1Q96N76 676 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 APOL5Q9BWW9 433 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 MIS12Q9H081 205 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 CXCL16Q9H2A7 254 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 PDE11AQ9HCR9 933 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 MAN1C1Q9NR34 630 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 ITGA11Q9UKX5 1188 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 CNTN6Q9UQ52 1028 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 REXO2Q9Y3B8 237 aaKnown RBP12.22□□□□□ -0.45
COPS7A-217ENST00000543537 SAR1BQ9Y6B6 198 aa12.22□□□□□ -0.45
COPS7A-217ENST00000543537 TISP43B9A030 160 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 C2CD2LO14523 706 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 FAM189A1O60320 539 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 KCNE1P15382 129 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 NAP1L1P55209 391 aaKnown RBP12.21□□□□□ -0.45
COPS7A-217ENST00000543537 RBP5P82980 135 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 CDR2Q01850 454 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 GFPT1Q06210 699 aaPredicted RBP12.21□□□□□ -0.45
COPS7A-217ENST00000543537 MYO1EQ12965 1108 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 CUL2Q13617 745 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 UPP1Q16831 310 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 ARHGAP44Q17R89 818 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 RTP2Q5QGT7 225 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 DCLRE1AQ6PJP8 1040 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 CD300LGQ6UXG3 332 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 TMC5Q6UXY8 1006 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 RTL10Q7L3V2 364 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 TRAPPC11Q7Z392 1133 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 UBALD2Q8IYN6 164 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 LNX1Q8TBB1 728 aaPredicted RBP12.21□□□□□ -0.45
COPS7A-217ENST00000543537 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 TTPALQ9BTX7 342 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 ZDHHC7Q9NXF8 308 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 CNTN3Q9P232 1028 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 SORCS3Q9UPU3 1222 aa12.21□□□□□ -0.45
COPS7A-217ENST00000543537 CACNA1HO95180 2353 aa12.21□□□□□ -0.46
COPS7A-217ENST00000543537 MYO10Q9HD67 2058 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 MTCL1Q9Y4B5 1905 aaKnown RBP12.2□□□□□ -0.46
COPS7A-217ENST00000543537 A0A087X0T9 212 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 TMEM221A6NGB7 291 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 M0R296 226 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 RIOK3O14730 519 aaKnown RBP12.2□□□□□ -0.46
COPS7A-217ENST00000543537 MED7O43513 233 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms