RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 RNF19BQ6ZMZ0 732 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
DDX55-210ENST00000543016 MYLPFQ96A32 169 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 CYFIP2Q96F07 1278 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 SMARCD1Q96GM5 515 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 MRFAP1L1Q96HT8 127 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 TWNKQ96RR1 684 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 TMEM209Q96SK2 561 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 IGFLR1Q9H665 355 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 MAN1C1Q9NR34 630 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 EHD2Q9NZN4 543 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 ASB3Q9Y575 518 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 TSC2P49815 1807 aa12.94□□□□□ -0.34
DDX55-210ENST00000543016 TRIM66O15016 1216 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ATP2C2O75185 946 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 XYLBO75191 536 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 C8AP07357 584 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 TPM1P09493 284 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 CD19P15391 556 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 EPCAMP16422 314 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 SOX5P35711 763 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 USP8P40818 1118 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ALDH1A3P47895 512 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 KLK7P49862 253 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 JAM2P57087 298 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 CYP27A1Q02318 531 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ITIH3Q06033 890 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 DUSP4Q13115 394 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 CNGA2Q16280 664 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ZNF394Q53GI3 561 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 PPM1LQ5SGD2 360 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ANKRD54Q6NXT1 300 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ITIH5Q86UX2 942 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 VSTM4Q8IW00 320 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ELMOD1Q8N336 334 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 MICALL1Q8N3F8 863 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ATAD1Q8NBU5 361 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 C8orf48Q96LL4 319 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 PGLYRP2Q96PD5 576 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 MED10Q9BTT4 135 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 B3GNT5Q9BYG0 378 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 UBXN6Q9BZV1 441 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 DPEP3Q9H4B8 488 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 ABI2Q9NYB9 513 aaPredicted RBP12.93□□□□□ -0.34
DDX55-210ENST00000543016 HESX1Q9UBX0 185 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 HMGXB4Q9UGU5 601 aa12.93□□□□□ -0.34
DDX55-210ENST00000543016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.92□□□□□ -0.34
DDX55-210ENST00000543016 HCRTO43612 131 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 VNN2O95498 520 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 LRG1P02750 347 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 FAM200BP0CF97 657 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 FERP16591 822 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 EPHB3P54753 998 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 APBA1Q02410 837 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 VEPH1Q14D04 833 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 MGAT5BQ3V5L5 792 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 LLGL2Q6P1M3 1020 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 LCLAT1Q6UWP7 414 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 ZNF677Q86XU0 584 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 FUKQ8N0W3 1084 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 ANKRD52Q8NB46 1076 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 LEMD2Q8NC56 503 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 VN1R2Q8NFZ6 395 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 SLC7A14Q8TBB6 771 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 SLC2A14Q8TDB8 520 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 SYN2Q92777 582 aaPredicted RBP12.92□□□□□ -0.34
DDX55-210ENST00000543016 HLA-CQ95604 372 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 SPATA17Q96L03 361 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 TTYH3Q9C0H2 523 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 GPR88Q9GZN0 384 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 PNPLA8Q9NP80 782 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 DMAP1Q9NPF5 467 aaPredicted RBP12.92□□□□□ -0.34
DDX55-210ENST00000543016 NLRC4Q9NPP4 1024 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 COMMD8Q9NX08 183 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 CLDND1Q9NY35 253 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 CAPN11Q9UMQ6 739 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 INSL5Q9Y5Q6 135 aa12.92□□□□□ -0.34
DDX55-210ENST00000543016 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
DDX55-210ENST00000543016 CHD7Q9P2D1 2997 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 RNF225M0QZC1 329 aaPredicted RBP12.91□□□□□ -0.34
DDX55-210ENST00000543016 O00370 1275 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 EPHB6O15197 1021 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 CYP26A1O43174 497 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 SEC24AO95486 1093 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 FGF19O95750 216 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 GLP2RO95838 553 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 BDNFP23560 247 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 ANXA13P27216 316 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 GNA15P30679 374 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 GTF2F1P35269 517 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX55-210ENST00000543016 ZNF75DP51815 510 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 ZBED6P86452 979 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 SKIV2LQ15477 1246 aaKnown RBP12.91□□□□□ -0.34
DDX55-210ENST00000543016 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
DDX55-210ENST00000543016 CES5AQ6NT32 575 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 FAM35AQ86V20 835 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 C12orf29Q8N999 325 aa12.91□□□□□ -0.34
DDX55-210ENST00000543016 MAFAQ8NHW3 353 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms