RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 LXNQ9BS40 222 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 OSBPL2Q9H1P3 480 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 OBP2AQ9NY56 170 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 FBXL5Q9UKA1 691 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 VAV3Q9UKW4 847 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 INVSQ9Y283 1065 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 PRKAB1Q9Y478 270 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 YIPF1Q9Y548 306 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 PLXNB3Q9ULL4 1909 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 ASXL3Q9C0F0 2248 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 SPTA1P02549 2419 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 PCDH15Q96QU1 1955 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 DYTNA2CJ06 578 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 TRDMT1O14717 391 aaKnown RBP8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 TRAPPC3O43617 180 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 GLRA2P23416 452 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 PSMA3P25788 255 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 PIK3CAP42336 1068 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 DHPSP49366 369 aaPredicted RBP8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 MCM2P49736 904 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 DGKEP52429 567 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 PPP2R5CQ13362 524 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 DMC1Q14565 340 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 TAF11Q15544 211 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 UPP1Q16831 310 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 XKR9Q5GH70 373 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 GLRA4Q5JXX5 417 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 SWT1Q5T5J6 900 aaKnown RBP8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 CCNI2Q6ZMN8 369 aaPredicted RBP8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 NUDT18Q6ZVK8 323 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 TTC30AQ86WT1 665 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 C4orf19Q8IY42 314 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 RPLP0P6Q8NHW5 317 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 BICD2Q8TD16 824 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 BPIFB1Q8TDL5 484 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 TBCKQ8TEA7 893 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 ADAMTS14Q8WXS8 1223 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 MPP4Q96JB8 637 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 UROC1Q96N76 676 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 PPP1R10Q96QC0 940 aaKnown RBP8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 NUSAP1Q9BXS6 441 aaKnown RBP8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 TPSD1Q9BZJ3 242 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 PDZD7Q9H5P4 517 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 GOLGA2P5Q9HBQ8 144 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 HPS4Q9NQG7 708 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 CLIC5Q9NZA1 410 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 AFF4Q9UHB7 1163 aaKnown RBP8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 PAXBP1Q9Y5B6 917 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 RAI2Q9Y5P3 530 aa8.37□□□□□ -1.07
NPIPB4-215ENST00000542133 CYP3A7-CYP3A51PA0A087WV96 503 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 A0A1W2PRQ8 180 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 H7C4K7 107 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 SLC27A2O14975 620 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 SYN3O14994 580 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 P4HBP07237 508 aaKnown RBP8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 CYP3A7P24462 503 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 ARL2P36404 184 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 MRPL58Q14197 206 aaKnown RBP8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 PTPAQ15257 358 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 USP39Q53GS9 565 aaKnown RBP8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 RASSF3Q86WH2 238 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 DAGLBQ8NCG7 672 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 CCDC148Q8NFR7 591 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 TSTD1Q8NFU3 115 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 EZH1Q92800 747 aaPredicted RBP8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 ACDQ96AP0 544 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 CDK5RAP3Q96JB5 506 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 PRIMPOLQ96LW4 560 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 DNAJC25Q9H1X3 360 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 FBRSL1Q9HCM7 1045 aaKnown RBP8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 DONSONQ9NYP3 566 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 DKK4Q9UBT3 224 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 MBD1Q9UIS9 605 aaPredicted RBP8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 PTPRDP23468 1912 aa8.36□□□□□ -1.07
NPIPB4-215ENST00000542133 ATXN2Q99700 1313 aaKnown RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 ADAMTS9Q9P2N4 1935 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 PTPN13Q12923 2485 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 URB1O60287 2271 aaKnown RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 A0A087WV48 116 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 KLF18A0A0U1RQI7 1052 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 ERICH4A6NGS2 130 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 OTOL1A6NHN0 477 aaPredicted RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 SOWAHDA6NJG2 315 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 N4BP3O15049 544 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 ZBTB39O15060 712 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 ATXN7O15265 892 aaPredicted RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 CCP110O43303 1012 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 SLC37A4O43826 429 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 VNN2O95498 520 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 FTH1P19P0C7X4 201 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 CPB1P15086 417 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 DRD1P21728 446 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 MAGEA8P43361 318 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 RCAN1P53805 252 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 SOX4Q06945 474 aaPredicted RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 RUNX3Q13761 415 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 HNRNPDQ14103 355 aaKnown RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 TRIM29Q14134 588 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 FBXO43Q4G163 708 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms