RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 CYP2F1P24903 491 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 HOXD13P35453 343 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 AP3M2P53677 418 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 KNOP1Q1ED39 458 aaKnown RBP12.2□□□□□ -0.46
VTN-203ENST00000542029 FOXD4L6Q3SYB3 417 aaPredicted RBP12.2□□□□□ -0.46
VTN-203ENST00000542029 LMBRD2Q68DH5 695 aaPredicted RBP12.2□□□□□ -0.46
VTN-203ENST00000542029 FOXD4L3Q6VB84 417 aaPredicted RBP12.2□□□□□ -0.46
VTN-203ENST00000542029 OSTM1Q86WC4 334 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 MAB21L3Q8N8X9 362 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 SUMF1Q8NBK3 374 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 GLIS3Q8NEA6 775 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 LRRC3BQ96PB8 259 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 MMS19Q96T76 1030 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 CGRRF1Q99675 332 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 SYT15Q9BQS2 421 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 TDP1Q9NUW8 608 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 MAGEC2Q9UBF1 373 aaPredicted RBP12.2□□□□□ -0.46
VTN-203ENST00000542029 MAGED2Q9UNF1 606 aaPredicted RBP12.2□□□□□ -0.46
VTN-203ENST00000542029 SLC38A8A6NNN8 435 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 EXOC3O60645 756 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 PAPSS2O95340 614 aaPredicted RBP12.19□□□□□ -0.46
VTN-203ENST00000542029 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
VTN-203ENST00000542029 PFKLP17858 780 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 ATICP31939 592 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 ID4P47928 161 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 CYP2J2P51589 502 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 DNM1Q05193 864 aaKnown RBP12.19□□□□□ -0.46
VTN-203ENST00000542029 FAM160A1Q05DH4 1040 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 CYP24A1Q07973 514 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 PSMD2Q13200 908 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 TRPC3Q13507 836 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 PDGFRLQ15198 375 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 DDR2Q16832 855 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 ERMP1Q7Z2K6 904 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 TMEM150AQ86TG1 271 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 SCN4BQ8IWT1 228 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 NELFCDQ8IXH7 590 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 RDH13Q8NBN7 331 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 MYCBPAPQ8TBZ2 947 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 CCDC127Q96BQ5 260 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 SPATA17Q96L03 361 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 FAM83CQ9BQN1 747 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 EPC1Q9H2F5 836 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 BLZF1Q9H2G9 400 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 SNX25Q9H3E2 840 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 GKN1Q9NS71 199 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 GTSE1Q9NYZ3 720 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 NCDNQ9UBB6 729 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 RAB23Q9ULC3 237 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 MYO15AQ9UKN7 3530 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 OTOGLQ3ZCN5 2332 aa12.19□□□□□ -0.46
VTN-203ENST00000542029 TRAV19A0A0A6YYK7 116 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 TRIM66O15016 1216 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 CLIC2O15247 247 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 KIF20AO95235 890 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 USP17L7P0C7H9 530 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 CMA1P23946 247 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 ANXA13P27216 316 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 CNR2P34972 360 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 GNL1P36915 607 aaPredicted RBP12.18□□□□□ -0.46
VTN-203ENST00000542029 AFMP43652 599 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 PPP3CCP48454 512 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 GPR15P49685 360 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 CDR1P51861 262 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 TNNC1P63316 161 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 GRSF1Q12849 480 aaKnown RBP eCLIP12.18□□□□□ -0.46
VTN-203ENST00000542029 CUL4BQ13620 913 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 RUNX3Q13761 415 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 WDR72Q3MJ13 1102 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 TXNDC8Q6A555 127 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 GPIHBP1Q8IV16 184 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 TMEM174Q8WUU8 243 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 USP13Q92995 863 aaPredicted RBP12.18□□□□□ -0.46
VTN-203ENST00000542029 CCDC47Q96A33 483 aaKnown RBP12.18□□□□□ -0.46
VTN-203ENST00000542029 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
VTN-203ENST00000542029 ZFYVE19Q96K21 471 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 SLC39A2Q9NP94 309 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 EXOC1Q9NV70 894 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 GMEB2Q9UKD1 530 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 ATP6V1DQ9Y5K8 247 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 CFAP54Q96N23 3096 aa12.18□□□□□ -0.46
VTN-203ENST00000542029 PTPRJQ12913 1337 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 PDCD11Q14690 1871 aaKnown RBP12.17□□□□□ -0.46
VTN-203ENST00000542029 ATG13O75143 517 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 PHACTR2O75167 634 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 TDGF1P13385 188 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 SDHBP21912 280 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 LMO2P25791 158 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 HOXA6P31267 233 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 GRIK1P39086 918 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 SOX9P48436 509 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 KRT85P78386 507 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 TNK2Q07912 1038 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 CCINQ13939 588 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 SDHAF4Q5VUM1 108 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 TXNDC11Q6PKC3 985 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 TSSK4Q6SA08 328 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 DENND5BQ6ZUT9 1274 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 SLC9A9Q8IVB4 645 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms