RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 ZNF77Q15935 545 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 IL17AQ16552 155 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 ZC2HC1CQ53FD0 456 aaPredicted RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 WSCD1Q658N2 575 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 TMEM92Q6UXU6 159 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 PIP4P1Q86T03 277 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 OSCP1Q8WVF1 389 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 MRPS31Q92665 395 aaKnown RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 FNBP1Q96RU3 617 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 PLIN2Q99541 437 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 PYM1Q9BRP8 204 aaKnown RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 PI4K2AQ9BTU6 479 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 MMTAG2Q9BU76 263 aaKnown RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 RPF1Q9H9Y2 349 aaKnown RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 C17orf75Q9HAS0 396 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 ZDHHC4Q9NPG8 344 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 EVLQ9UI08 416 aaPredicted RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 MBD1Q9UIS9 605 aaPredicted RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 TNRC6BQ9UPQ9 1833 aaKnown RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 ASXL3Q9C0F0 2248 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 TCHHQ07283 1943 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 ANO9A1A5B4 782 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 XPOTO43592 962 aaKnown RBP12.74□□□□□ -0.37
COPA-205ENST00000541366 GUCY2CP25092 1073 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 DDX6P26196 483 aaKnown RBP eCLIP12.74□□□□□ -0.37
COPA-205ENST00000541366 OPRD1P41143 372 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 IFNAR2P48551 515 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 MESP2Q0VG99 397 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 ORC2Q13416 577 aaPredicted RBP12.74□□□□□ -0.37
COPA-205ENST00000541366 PDIA5Q14554 519 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 ZNF268Q14587 947 aaPredicted RBP12.74□□□□□ -0.37
COPA-205ENST00000541366 SAFBQ15424 915 aaKnown RBP eCLIP12.74□□□□□ -0.37
COPA-205ENST00000541366 DDR2Q16832 855 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 CCDC142Q17RM4 750 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 PROSER1Q86XN7 944 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 EFCAB13Q8IY85 973 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 OR2I1PQ8NGU4 316 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 SPPL2BQ8TCT7 592 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
COPA-205ENST00000541366 NUSAP1Q9BXS6 441 aaKnown RBP12.74□□□□□ -0.37
COPA-205ENST00000541366 SLC32A1Q9H598 525 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 MMP17Q9ULZ9 603 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 GPSM3Q9Y4H4 160 aa12.74□□□□□ -0.37
COPA-205ENST00000541366 APC2O95996 2303 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 ACACAQ13085 2346 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
COPA-205ENST00000541366 MYOFQ9NZM1 2061 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 ANAPC1Q9H1A4 1944 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 OGTO15294 1046 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 PRPF40AO75400 957 aaKnown RBP12.73□□□□□ -0.37
COPA-205ENST00000541366 ADRB2P07550 413 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 LIG4P49917 911 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 SMTNP53814 917 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 FAM160A1Q05DH4 1040 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 USP4Q13107 963 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 SEMA3BQ13214 749 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 CRY1Q16526 586 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 GAB4Q2WGN9 574 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 SLC39A4Q6P5W5 647 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 C11orf74Q86VG3 221 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 METTL23Q86XA0 190 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 THEM5Q8N1Q8 247 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 DEFB119Q8N690 84 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 OLIG1Q8TAK6 271 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 LRRC15Q8TF66 581 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 ATP2A3Q93084 1043 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 ZMYM5Q9UJ78 669 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 PCDHB5Q9Y5E4 795 aa12.73□□□□□ -0.37
COPA-205ENST00000541366 C2orf78A6NCI8 922 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 TISP43B9A030 160 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 HNRNPDLO14979 420 aaKnown RBP12.72□□□□□ -0.37
COPA-205ENST00000541366 MAP3K13O43283 966 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 CKMP06732 381 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 ITPKAP23677 461 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 CYP2F1P24903 491 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 P2RY2P41231 377 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 TOB1P50616 345 aaPredicted RBP12.72□□□□□ -0.37
COPA-205ENST00000541366 NCKAP1LP55160 1127 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 ZXDBP98169 803 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 LMAN2Q12907 356 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 TMEM132DQ14C87 1099 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 COL28A1Q2UY09 1125 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 KRT79Q5XKE5 535 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 SCARA3Q6AZY7 606 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 LPCAT2Q7L5N7 544 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 PDZD3Q86UT5 571 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 SYT12Q8IV01 421 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 ALLCQ8N6M5 410 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 ARL14EPQ8N8R7 260 aaPredicted RBP12.72□□□□□ -0.37
COPA-205ENST00000541366 SH3RF2Q8TEC5 729 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 C2orf15Q8WU43 125 aaKnown RBP12.72□□□□□ -0.37
COPA-205ENST00000541366 EXOC4Q96A65 974 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 PNMA5Q96PV4 448 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 MSTO1Q9BUK6 570 aa12.72□□□□□ -0.37
COPA-205ENST00000541366 GTPBP2Q9BX10 602 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms