RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ROR2Q01974 943 aaKnown RBP10.97□□□□□ -0.65
CHFR-219ENST00000541341 PTK6Q13882 451 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 MBTPS1Q14703 1052 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 ENOX2Q16206 610 aaKnown RBP10.97□□□□□ -0.65
CHFR-219ENST00000541341 DGKDQ16760 1214 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 GSTA3Q16772 222 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 CDCA2Q69YH5 1023 aaPredicted RBP10.97□□□□□ -0.65
CHFR-219ENST00000541341 IRGCQ6NXR0 463 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 CNKSR3Q6P9H4 555 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 ZDHHC24Q6UX98 284 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 EP400NLQ6ZTU2 488 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 EXOC3L1Q86VI1 746 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 C12orf56Q8IXR9 622 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 ATL2Q8NHH9 583 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
CHFR-219ENST00000541341 STAMBPL1Q96FJ0 436 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 BICD1Q96G01 975 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 CDHR1Q96JP9 859 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 TGS1Q96RS0 853 aaKnown RBP10.97□□□□□ -0.65
CHFR-219ENST00000541341 TSC22D3Q99576 134 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 C17orf80Q9BSJ5 609 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 ADAM7Q9H2U9 754 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 MMADHCQ9H3L0 296 aaPredicted RBP10.97□□□□□ -0.65
CHFR-219ENST00000541341 PARVGQ9HBI0 331 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 KCNK9Q9NPC2 374 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 SIX2Q9NPC8 291 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 CD320Q9NPF0 282 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 SCOCQ9UIL1 159 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 KCNG1Q9UIX4 513 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 GTF3C4Q9UKN8 822 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 NCOR1O75376 2440 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 LINC01553A4QN01 128 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 FAM47DPA6NHR8 397 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 ENO4A6NNW6 628 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 SPATA31C2B4DYI2 1134 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 E9PMD0 336 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 FSCN2O14926 492 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 PRPF4O43172 522 aaKnown RBP eCLIP10.96□□□□□ -0.651e-6■■□□□ 12.8
CHFR-219ENST00000541341 SPOPO43791 374 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 SNUPNO95149 360 aaKnown RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 CTSHP09668 335 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 TGFB3P10600 412 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 BRAFP15056 766 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 ATF2P15336 505 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 PECAM1P16284 738 aaPredicted RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 TSHRP16473 764 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 FLT3P36888 993 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 PLA2G5P39877 138 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 THPOP40225 353 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 RPL21P46778 160 aaKnown RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 MFAP3P55082 362 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 SP2Q02086 613 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 KPNB1Q14974 876 aaKnown RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 TRADDQ15628 312 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 HSDL1Q3SXM5 330 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 GNPTABQ3T906 1256 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 SLC45A4Q5BKX6 768 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 C6orf163Q5TEZ5 329 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 PCGF5Q86SE9 256 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 NLRX1Q86UT6 975 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 ZNF677Q86XU0 584 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 RBBP8NLQ8NC74 664 aaPredicted RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 ETNPPLQ8TBG4 499 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 PIP4K2CQ8TBX8 421 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 MDM1Q8TC05 714 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 ZNF483Q8TF39 744 aaPredicted RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 APBB2Q92870 758 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 THOC1Q96FV9 657 aaKnown RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 NACC1Q96RE7 527 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 TRIM51Q9BSJ1 452 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 SYT11Q9BT88 431 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 LRFN3Q9BTN0 628 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 CELF4Q9BZC1 486 aaKnown RBP10.96□□□□□ -0.65
CHFR-219ENST00000541341 TRIM31Q9BZY9 425 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 ETNK1Q9HBU6 452 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 IL1RAPL1Q9NZN1 696 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 PDP2Q9P2J9 529 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 SLC24A2Q9UI40 661 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 LNPEPQ9UIQ6 1025 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 TELO2Q9Y4R8 837 aa10.96□□□□□ -0.65
CHFR-219ENST00000541341 NFASCO94856 1347 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 ANKRD33BA6NCL7 494 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 A8MXQ7 604 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 CCDC22O60826 627 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 AKAP3O75969 853 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 GJB5O95377 273 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 POU3F3P20264 500 aaPredicted RBP10.95□□□□□ -0.66
CHFR-219ENST00000541341 PAX7P23759 505 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 ZNF76P36508 570 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 MCCD1P59942 119 aaPredicted RBP10.95□□□□□ -0.66
CHFR-219ENST00000541341 IRX4P78413 519 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 SP4Q02446 784 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 MTMR1Q13613 665 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 IKBKEQ14164 716 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 SEPT7Q16181 437 aaKnown RBP10.95□□□□□ -0.66
CHFR-219ENST00000541341 TRIM71Q2Q1W2 868 aaKnown RBP10.95□□□□□ -0.66
CHFR-219ENST00000541341 PHLDB3Q6NSJ2 640 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 TRAF7Q6Q0C0 670 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms