RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 CPA3P15088 417 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 CCND1P24385 295 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 HTR2BP41595 481 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 MLLT3P42568 568 aaPredicted RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 HPCAP84074 193 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 MKRN4PQ13434 485 aaPredicted RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 ADAM9Q13443 819 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 RIPK1Q13546 671 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 MRPL58Q14197 206 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 ADRM1Q16186 407 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 AARDQ4LEZ3 155 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 GPATCH4Q5T3I0 446 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 TMC5Q6UXY8 1006 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 FASTKD5Q7L8L6 764 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 PATL1Q86TB9 770 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 SLC51AQ86UW1 340 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 TBC1D19Q8N5T2 526 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 EXD1Q8NHP7 514 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 EXOC2Q96KP1 924 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 WDR24Q96S15 920 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 BTBD2Q9BX70 525 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 PUS7LQ9H0K6 701 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 INTS9Q9NV88 658 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 TRPM5Q9NZQ8 1165 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 RNF112Q9ULX5 631 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 SPATA2Q9UM82 520 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 COG5Q9UP83 839 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 SPEF2Q9C093 1822 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 FBP2O00757 339 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 ALDH1A2O94788 518 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 UQCRFS1P1P0C7P4 283 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 RARBP10826 455 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 ARSDP51689 593 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 PPP2R2BQ00005 443 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 DHX9Q08211 1270 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 NFIXQ14938 502 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 TSC22D1Q15714 1073 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 DALRD3Q5D0E6 543 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 TPGS2Q68CL5 300 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 COMTD1Q86VU5 262 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 CBARPQ8N350 705 aaPredicted RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 MAGEB6Q8N7X4 407 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 ATAD1Q8NBU5 361 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 NAXEQ8NCW5 288 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 MTMR8Q96EF0 704 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 MFSD14AQ96MC6 490 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 PPP1R10Q96QC0 940 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 GAS2L1Q99501 681 aaPredicted RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 ELAC2Q9BQ52 826 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 SH2D4AQ9H788 454 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 ABI2Q9NYB9 513 aaPredicted RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 TFCP2L1Q9NZI6 479 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 COX16Q9P0S2 106 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 HMG20BQ9P0W2 317 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 LRP2BPQ9P2M1 347 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 AFF4Q9UHB7 1163 aaKnown RBP6.47□□□□□ -1.37
LMO3-225ENST00000541295 STX8Q9UNK0 236 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 DMTF1Q9Y222 760 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 THSD7AQ9UPZ6 1657 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 TAF1P21675 1872 aa6.47□□□□□ -1.37
LMO3-225ENST00000541295 KANSL1LA0AUZ9 987 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 PDPK1O15530 556 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 GPAA1O43292 621 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 APBA3O96018 575 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 PABPC4LP0CB38 370 aaKnown RBP6.46□□□□□ -1.37
LMO3-225ENST00000541295 HSPD1P10809 573 aaKnown RBP6.46□□□□□ -1.37
LMO3-225ENST00000541295 SCNN1AP37088 669 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 IRAK1P51617 712 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 ADCY7P51828 1080 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 CENPCQ03188 943 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 DCTN2Q13561 401 aaKnown RBP6.46□□□□□ -1.37
LMO3-225ENST00000541295 TKFCQ3LXA3 575 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 SHEQ5VZ18 495 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 GPR139Q6DWJ6 353 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 STRA8Q7Z7C7 330 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 CROCCP3Q8IVE0 287 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 SLC38A6Q8IZM9 456 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 ANKRD35Q8N283 1001 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 C2orf69Q8N8R5 385 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 OR8K3Q8NH51 312 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 ADAM32Q8TC27 787 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 FBF1Q8TES7 1133 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 HNRNPLLQ8WVV9 542 aaKnown RBP6.46□□□□□ -1.37
LMO3-225ENST00000541295 ZNF570Q96NI8 536 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 PIGSQ96S52 555 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 TCF25Q9BQ70 676 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 UCK1Q9HA47 277 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 FAM114A2Q9NRY5 505 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 FAM8A1Q9UBU6 413 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 PCDHGB7Q9Y5F8 929 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 PCDHGA2Q9Y5H1 932 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 ZNF532Q9HCE3 1301 aa6.46□□□□□ -1.37
LMO3-225ENST00000541295 H3BRB1 525 aa6.46□□□□□ -1.38
LMO3-225ENST00000541295 EIF3HO15372 352 aaKnown RBP eCLIP6.46□□□□□ -1.38
LMO3-225ENST00000541295 ECE2O60344 883 aa6.46□□□□□ -1.38
LMO3-225ENST00000541295 BMP10O95393 424 aa6.46□□□□□ -1.38
LMO3-225ENST00000541295 ASMTLO95671 621 aa6.46□□□□□ -1.38
LMO3-225ENST00000541295 CLPTM1O96005 669 aa6.46□□□□□ -1.38
LMO3-225ENST00000541295 CYP3A4P08684 503 aa6.46□□□□□ -1.38
LMO3-225ENST00000541295 VCLP18206 1134 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms