RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MANSC1Q9H8J5 431 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 ACTL7BQ9Y614 415 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 A0A1B0GVG6 124 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MEI4A8MW99 385 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 NVLO15381 856 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SMIM24O75264 130 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 RGS20O76081 388 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 TJP3O95049 919 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 EGFRP00533 1210 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ABHD2P08910 425 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MYL2P10916 166 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 BIRC2Q13490 618 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 THOC5Q13769 683 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 KBTBD12Q3ZCT8 623 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 CCNJLQ8IV13 435 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 WDTC1Q8N5D0 677 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 HSPH1Q92598 858 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ACAP3Q96P50 834 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SHCBP1LQ9BZQ2 653 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 TAS2R1Q9NYW7 299 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 FEM1BQ9UK73 627 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZNRF3Q9ULT6 936 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 NR2E3Q9Y5X4 410 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 GSC2O15499 205 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SORBS2O94875 1100 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 STBD1O95210 358 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ENO1P06733 434 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZCCHC18P0CG32 403 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ARL4CP56559 192 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MYL6P60660 151 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 KDSRQ06136 332 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 NCOA4Q13772 614 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 DLGAP5Q15398 846 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 LRRC36Q1X8D7 754 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MEX3CQ5U5Q3 659 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZCCHC23Q6ZST2 131 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 TREML1Q86YW5 311 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 PALM2Q8IXS6 379 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MZB1Q8WU39 189 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 DCAKDQ8WVC6 231 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 CFAP36Q96G28 342 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 TSSK1BQ9BXA7 367 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SLC13A1Q9BZW2 595 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 PXMP2Q9NR77 195 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 PARVAQ9NVD7 372 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 CYTH4Q9UIA0 394 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 XPO7Q9UIA9 1087 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 HERC5Q9UII4 1024 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 H3BRJ5 948 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 C2CD2LO14523 706 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 PMM2O15305 246 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 LPXNO60711 386 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 WFS1O76024 890 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 F7P08709 466 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MMP8P22894 467 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SP100P23497 879 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ELK3P41970 407 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 CCNG1P51959 295 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SATB1Q01826 763 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SPDYE2Q495Y8 402 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 EFHC2Q5JST6 749 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 PRAMEF18Q5VWM3 479 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 FYB2Q5VWT5 728 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 VPS52Q8N1B4 723 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 EFCAB3Q8N7B9 438 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 TTLL6Q8N841 843 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 NETO2Q8NC67 525 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 BBOF1Q8ND07 529 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 INPP5DQ92835 1189 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MCUR1Q96AQ8 359 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ATG4CQ96DT6 458 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZNF333Q96JL9 665 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 IWS1Q96ST2 819 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MSTO1Q9BUK6 570 aa10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MOV10L1Q9BXT6 1211 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 MRPL47Q9HD33 250 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZNF277Q9NRM2 450 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 SMG5Q9UPR3 1016 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-207ENST00000540998 E2F8A0AVK6 867 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 CXorf49A8MYA2 514 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 KBTBD13C9JR72 458 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 ARFIP2P53365 341 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 CDH8P55286 799 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 YWHAGP61981 247 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 MORF4L2Q15014 288 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 HSF5Q4G112 596 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 TFDP3Q5H9I0 405 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 DENND1BQ6P3S1 775 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 RELL1Q8IUW5 271 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 CTAGE3PQ8IX95 158 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 BANPQ8N9N5 519 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 TEKT4Q8WW24 435 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 PTCD3Q96EY7 689 aaKnown RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 FAM161BQ96MY7 647 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 CALN1Q9BXU9 219 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 TBC1D22BQ9NU19 505 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 SLC17A6Q9P2U8 582 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms