RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 GNA14O95837 355 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 BDNFP23560 247 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 EPHA5P54756 1037 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
SNHG1-215ENST00000540904 ORC1Q13415 861 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 TDGQ13569 410 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 TEAD2Q15562 447 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 DPCR1Q3MIW9 517 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 WDR44Q5JSH3 913 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 PARM1Q6UWI2 310 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 ACOT1Q86TX2 421 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 TMC8Q8IU68 726 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 CREBRFQ8IUR6 639 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 LEMD2Q8NC56 503 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 STKLD1Q8NE28 680 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 SHKBP1Q8TBC3 707 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 EDAQ92838 391 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 FUBP3Q96I24 572 aaKnown RBP eCLIP9.84□□□□□ -0.83
SNHG1-215ENST00000540904 MED15Q96RN5 788 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 C1QTNF1Q9BXJ1 281 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 LRRC3Q9BY71 257 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 BCO2Q9BYV7 579 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 NIF3L1Q9GZT8 377 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 SLITRK6Q9H5Y7 841 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 ZNF334Q9HCZ1 680 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-215ENST00000540904 GDE1Q9NZC3 331 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 IGSF9Q9P2J2 1179 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 HMGXB4Q9UGU5 601 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 METRNQ9UJH8 293 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 MAGED2Q9UNF1 606 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-215ENST00000540904 NUMBLQ9Y6R0 609 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 MTCL1Q9Y4B5 1905 aaKnown RBP9.84□□□□□ -0.83
SNHG1-215ENST00000540904 CLDN5O00501 218 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 MOSPD3O75425 235 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 MICAL2O94851 1124 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 FGF19O95750 216 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 MBD3O95983 291 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 CSH1P0DML2 217 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 CSH2P0DML3 217 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 CCDC192P0DO97 292 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 CD58P19256 250 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 GABRR2P28476 465 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 GRIK1P39086 918 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 MAGEA11P43364 429 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 FMO5P49326 533 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 NDST1P52848 882 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 NLRP12P59046 1061 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 HTR4Q13639 388 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 TPD52L1Q16890 204 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-215ENST00000540904 TMEM31Q5JXX7 168 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 VSTM1Q6UX27 236 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 GAREM2Q75VX8 874 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 MTSS1LQ765P7 747 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 TRIM59Q8IWR1 403 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 UBALD2Q8IYN6 164 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 SLC44A3Q8N4M1 653 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 FGF14Q92915 247 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 NXPE3Q969Y0 559 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 TNIP3Q96KP6 325 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 ZSWIM3Q96MP5 696 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 KXD1Q9BQD3 176 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 MED10Q9BTT4 135 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 B3GNT5Q9BYG0 378 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 ZNF518BQ9C0D4 1074 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 ATXN3LQ9H3M9 355 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 CYP3A43Q9HB55 503 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 DACH1Q9UI36 760 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 COQ4Q9Y3A0 265 aa9.83□□□□□ -0.84
SNHG1-215ENST00000540904 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.83□□□□□ -0.84
SNHG1-215ENST00000540904 CUL9Q8IWT3 2517 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 SLC38A8A6NNN8 435 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 F8VP50 259 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 CCDC130P13994 396 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 HMGA1P17096 107 aaKnown RBP9.82□□□□□ -0.84
SNHG1-215ENST00000540904 TRIM21P19474 475 aaKnown RBP9.82□□□□□ -0.84
SNHG1-215ENST00000540904 ANXA13P27216 316 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 CDC25CP30307 473 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 MARSP56192 900 aaKnown RBP9.82□□□□□ -0.84
SNHG1-215ENST00000540904 SIGLEC14Q08ET2 396 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 INCA1Q0VD86 236 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 CETN1Q12798 172 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 KCNH2Q12809 1159 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 LRMPQ12912 555 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 ARHGAP15Q53QZ3 475 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 FAM78AQ5JUQ0 283 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 STXBP5Q5T5C0 1151 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 TRIM67Q6ZTA4 783 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 UNC93AQ86WB7 457 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 C12orf29Q8N999 325 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 ZSCAN18Q8TBC5 510 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-215ENST00000540904 TATDN2Q93075 761 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 CNOT6LQ96LI5 555 aaKnown RBP9.82□□□□□ -0.84
SNHG1-215ENST00000540904 GCNAQ96QF7 691 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 TWNKQ96RR1 684 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 ARID3AQ99856 593 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 RPP25Q9BUL9 199 aaKnown RBP9.82□□□□□ -0.84
SNHG1-215ENST00000540904 NT5C1AQ9BXI3 368 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 ELOVL4Q9GZR5 314 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 C11orf16Q9NQ32 467 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 FAM49BQ9NUQ9 324 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms