RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ZDHHC9Q9Y397 364 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 PCDHGA2Q9Y5H1 932 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 TACC1O75410 805 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 MYL1P05976 194 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 HSP90AA1P07900 732 aaKnown RBP14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 ACAT1P24752 427 aaKnown RBP14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 LMO2P25791 158 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 CYP4F8P98187 520 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 PSMD2Q13200 908 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 WDR44Q5JSH3 913 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 LMBRD2Q68DH5 695 aaPredicted RBP14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 HS2ST1Q7LGA3 356 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 MON1AQ86VX9 555 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 SLC9A9Q8IVB4 645 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 CSGALNACT1Q8TDX6 532 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 ZNF516Q92618 1163 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 PAGE5Q96GU1 130 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 GCNAQ96QF7 691 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 CGRRF1Q99675 332 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 FAM83CQ9BQN1 747 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 VRTNQ9H8Y1 702 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 LMAN1LQ9HAT1 526 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 DMAC2Q9NW81 257 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 ZSCAN32Q9NX65 697 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 UXTQ9UBK9 157 aaPredicted RBP14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 USP25Q9UHP3 1055 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 SERTAD1Q9UHV2 236 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 CDH9Q9ULB4 789 aa14.05□□□□□ -0.16
SEMA4D-223ENST00000540475 CLIC2O15247 247 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 HCRTO43612 131 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 TADA3O75528 432 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 PAPSS2O95340 614 aaPredicted RBP14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 CCNE1P24864 410 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 AFMP43652 599 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 GPR15P49685 360 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 CDR1P51861 262 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 CSTF1Q05048 431 aaKnown RBP14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 GAS6Q14393 721 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 TAF12Q16514 161 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 DDR2Q16832 855 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 FOXD4L6Q3SYB3 417 aaPredicted RBP14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 VSTM1Q6UX27 236 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 FOXD4L3Q6VB84 417 aaPredicted RBP14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 RDH13Q8NBN7 331 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 GOLGA5Q8TBA6 731 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 USP13Q92995 863 aaPredicted RBP14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 SPATA17Q96L03 361 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 XYLT2Q9H1B5 865 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 KIF9Q9HAQ2 790 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 SLC39A2Q9NP94 309 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 CRTAC1Q9NQ79 661 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 NDRG2Q9UN36 371 aaKnown RBP14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 NME7Q9Y5B8 376 aa14.04□□□□□ -0.16
SEMA4D-223ENST00000540475 SLC38A8A6NNN8 435 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 SPECC1L-ADORA2AF8WAN1 911 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 DPYSL4O14531 572 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 KINO60870 393 aaKnown RBP14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 ATP2C2O75185 946 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 ATICP31939 592 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 CTHP32929 405 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 STK4Q13043 487 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 CCINQ13939 588 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 MAPRE1Q15691 268 aaKnown RBP14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 CCDC142Q17RM4 750 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 TXNDC11Q6PKC3 985 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 C4orf50Q6ZRC1 276 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 SPATA2LQ8IUW3 424 aaPredicted RBP14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 GPIHBP1Q8IV16 184 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 NELFCDQ8IXH7 590 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 CEP57L1Q8IYX8 460 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 SYNPOQ8N3V7 929 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 KIAA0895Q8NCT3 520 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 MYCBPAPQ8TBZ2 947 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 NOC3LQ8WTT2 800 aaKnown RBP14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 ZFYVE19Q96K21 471 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 FNBP1Q96RU3 617 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 EPC1Q9H2F5 836 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 KCTD10Q9H3F6 313 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 TDP1Q9NUW8 608 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 THG1LQ9NWX6 298 aaKnown RBP14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 GTSE1Q9NYZ3 720 aa14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 MAGEC2Q9UBF1 373 aaPredicted RBP14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 R3HCC1Q9Y3T6 440 aaKnown RBP14.03□□□□□ -0.16
SEMA4D-223ENST00000540475 MYO16Q9Y6X6 1858 aa14.02□□□□□ -0.16
SEMA4D-223ENST00000540475 KIAA1549LQ6ZVL6 1849 aa14.02□□□□□ -0.16
SEMA4D-223ENST00000540475 DLATP10515 647 aaKnown RBP14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 TCF3P15923 654 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 PFKFB1P16118 471 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 PFKLP17858 780 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 TNNI1P19237 187 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 CYP2J2P51589 502 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 CCR3P51677 355 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 KPNA1P52294 538 aaPredicted RBP14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 AP3M2P53677 418 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 MCCD1P59942 119 aaPredicted RBP14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 LRRC32Q14392 662 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 DGKKQ5KSL6 1271 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 SDHAF4Q5VUM1 108 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 TXNDC8Q6A555 127 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 GRAMD1CQ8IYS0 662 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms