RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 IRX4P78413 519 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 MYBPC2Q14324 1141 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 FAM102BQ5T8I3 360 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 LMBRD2Q68DH5 695 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 TREML1Q86YW5 311 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 KATNAL2Q8IYT4 538 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 BANPQ8N9N5 519 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 POMGNT1Q8WZA1 660 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 LENG1Q96BZ8 264 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 CCDC28BQ9BUN5 200 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 WDR11Q9BZH6 1224 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 AVENQ9NQS1 362 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 ATRNL1Q5VV63 1379 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
SFSWAP-209ENST00000540469 DDX60LQ5H9U9 1706 aaKnown RBP13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 FKBP6O75344 327 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 GDF11O95390 407 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 ATP6V1B1P15313 513 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 RAP1GDS1P52306 607 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 ACTR3P61158 418 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 C1orf220Q5T0J3 134 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 CRLF3Q8IUI8 442 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 ALLCQ8N6M5 410 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 ARL10Q8N8L6 244 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 HELQQ8TDG4 1101 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 MECRQ9BV79 373 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 TMCC1O94876 653 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 CIITAP33076 1130 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 CACNB3P54284 484 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 DHDDSQ86SQ9 333 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 ICA1LQ8NDH6 482 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 STKLD1Q8NE28 680 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 GJD4Q96KN9 370 aaPredicted RBP13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 KLHL4Q9C0H6 718 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 KCNK13Q9HB14 408 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 TMEM8AQ9HCN3 771 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 KCND2Q9NZV8 630 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 SAE1Q9UBE0 346 aaPredicted RBP13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 ARFGEF1Q9Y6D6 1849 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 MAST2Q6P0Q8 1798 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 NDC80O14777 642 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 PDE5AO76074 875 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 ITGA2BP08514 1039 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 CRABP2P29373 138 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 RNASEH2BQ5TBB1 312 aaKnown RBP13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 ATG16L1Q676U5 607 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 RCOR2Q8IZ40 523 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 APOPT1Q96IL0 206 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 CCDC17Q96LX7 622 aa13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 DDX43Q9NXZ2 648 aaKnown RBP13.44□□□□□ -0.26
SFSWAP-209ENST00000540469 PRR5-ARHGAP8B1AHC4 643 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 VCPP55072 806 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 ARHGAP8P85298 464 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 SLC25A3Q00325 362 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 FAAP100Q0VG06 881 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 CHI3L2Q15782 390 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 EFHC1Q5JVL4 640 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 MAP7D3Q8IWC1 876 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 DAW1Q8N136 415 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 POU5F2Q8N7G0 328 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PPM1NQ8N819 430 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PIP4K2CQ8TBX8 421 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 AZIN2Q96A70 460 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 ACSS3Q9H6R3 686 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 SSU72Q9NP77 194 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 GPRC5CQ9NQ84 441 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 EXOC7Q9UPT5 735 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PCDHB2Q9Y5E7 798 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 CLUHO75153 1309 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PSMD10O75832 226 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 TNNI1P19237 187 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 AQP4P55087 323 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 BTKQ06187 659 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 ALCAMQ13740 583 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PDK3Q15120 406 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PRKD1Q15139 912 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PCGF5Q86SE9 256 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 NUDCD3Q8IVD9 361 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PPIL6Q8IXY8 311 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 KCTD17Q8N5Z5 321 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 CRYGNQ8WXF5 182 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 E2F7Q96AV8 911 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 CFAP36Q96G28 342 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 KIFC3Q9BVG8 833 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 PCDHB4Q9Y5E5 795 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 SCINQ9Y6U3 715 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 DENND3A2RUS2 1198 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 TGDSO95455 350 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 IMPDH2P12268 514 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 ADSSP30520 456 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 BPIFB4P59827 614 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 UBAP2LQ14157 1087 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 FNBP1LQ5T0N5 605 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 ANKRD22Q5VYY1 191 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 SV2AQ7L0J3 742 aa13.43□□□□□ -0.26
SFSWAP-209ENST00000540469 DDX1Q92499 740 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms